Ss1.1-rpigcb_12224.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAAAAGGTCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAGGTAGGAGGTG GTTCTATCCGAATTCATAATGCCGAACTACAGCGTTACGTCCTGGCAGCAGTACTAAAGG AAGACGTGAAATTGCTCTCCCATCTGCTGCAGGCTTTAGATTATGGGGCGCCCCCTCATG GAGGAATTGCCTTAGGGTTAGACAGATTGATGTGCCTTGTCACGGGAGCACCGAGCATCA GAGATGTTATAGCCTTCCCCAAATCCTTCCGGGGGCATGACCTCATGAGCAATGCCCCAG ATTCTATCCCTCCTGAGGACCTGAAGCCCTATCATATCCAGGTCTCTTGGCCAACAGATT CAGCAAAAGAAAGCTCATTGAGTCATTCATGCCATCCAGAAAGTTGAGCCTTTGGGTTTT GACCTCTCTGCTTCCTCAAGGCTAAAATCAGATCCAGAGTTCAGCCACTGATCTTACTTC AAGTCTTTTGATGGAAGGAATCCGGGCCACATTCTTCACCACAATGAAGAAACAGATAAA GGGTATCCAATGTTAACTTGATAACATTCATTAATTAGGATTATTTTATTTAGGATTTTT GAAGTGTCTTTTTAGGAAAGTGTGAAAGGTGGCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAAAAGGTCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAGGTAGGAGGTG GTTCTATCCGAATTCATAATGCCGAACTACAGCGTTACGTCCTGGCAGCAGTACTAAAGG AAGACGTGAAATTGCTCTCCCATCTGCTGCAGGCTTTAGATTATGGGGCGCCCCCTCATG GAGGAATTGCCTTAGGGTTAGACAGATTGATGTGCCTTGTCACGGGAGCACCGAGCATCA GAGATGTTATAGCCTTCCCCAAATCCTTCCGGGGGCATGACCTCATGAGCAATGCCCCAG ATTCTATCCCTCCTGAGGACCTGAAGCCCTATCATATCCAGGTCTCTTGGCCAACAGATT CAGCAAAAGAAAGCTCATTGAGTCATTCATGCCATCCAGAAAGTTGAGCCTTTGGGTTTT GACCTCTCTGCTTCCTCAAGGCTAAAATCAGATCCAGAGTTCAGCCACTGATCTTACTTC AAGTCTTTTGATGGAAGGAATCCGGGCCACATTCTTCACCACAATGAAGAAACAGATAAA GGGTATCCAATGTTAACTTGATAACATTCATTAATTAGGATTATTTTATTTAGGATTTTT GAAGTGTCTTTTTAGGAAAGTGTGAAAGGTGGCTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 7-120, gnl|bosTau2|chr21 (47537204-47537317) | |
| 7-120, gnl|canFam2|chr7 (28349033-28348887) | |
| 7-120, gnl|danRer3|chr2 (24325826-24325679) | |
| 7-120, gnl|dasNov1|scaffold_143028 (1012-866) | |
| 7-120, gnl|fr1|chrUn (322297126-322297010) | |
| 7-120, gnl|galGal2|chr8 (5604549-5604693) | |
| 7-120, gnl|hg17|chr1 (170554559-170554709) | |
| 7-120, gnl|Hg17|chr1 (170554588-170554701) | |
| 7-120, gnl|mm7|chr1 (161007471-161007322) | |
| 7-120, gnl|Mm7|chr1 (161007441-161007328) | |
| 7-120, gnl|monDom2|scaffold_16 (25177143-25177293) | |
| 7-120, gnl|oryCun1|scaffold_194603 (41501-41353) | |
| 7-120, gnl|panTro1|chr1 (152925970-152926120) | |
| 7-120, gnl|rheMac2|chr1 (203493515-203493664) | |
| 7-120, gnl|rn3|chr13 (76617383-76617234) | |
| 7-120, gnl|tetNig1|chrUn_random (89017731-89017611) | |
| 7-120, gnl|xenTro1|scaffold_197 (1296912-1297046) | |
| 194-636, gnl|bosTau2|chr21 (47540217-47540658) | |
| 194-636, gnl|Hg17|chr1 (170558311-170558759) | |
| 194-636, gnl|Mm7|chr1 (161004307-161003878) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-120, gnl|bosTau2|chr21 (47537204-47537317) | |
| 7-120, gnl|canFam2|chr7 (28349033-28348887) | |
| 7-120, gnl|danRer3|chr2 (24325826-24325679) | |
| 7-120, gnl|dasNov1|scaffold_143028 (1012-866) | |
| 7-120, gnl|fr1|chrUn (322297126-322297010) | |
| 7-120, gnl|galGal2|chr8 (5604549-5604693) | |
| 7-120, gnl|hg17|chr1 (170554559-170554709) | |
| 7-120, gnl|Hg17|chr1 (170554588-170554701) | |
| 7-120, gnl|mm7|chr1 (161007471-161007322) | |
| 7-120, gnl|Mm7|chr1 (161007441-161007328) | |
| 7-120, gnl|monDom2|scaffold_16 (25177143-25177293) | |
| 7-120, gnl|oryCun1|scaffold_194603 (41501-41353) | |
| 7-120, gnl|panTro1|chr1 (152925970-152926120) | |
| 7-120, gnl|rheMac2|chr1 (203493515-203493664) | |
| 7-120, gnl|rn3|chr13 (76617383-76617234) | |
| 7-120, gnl|tetNig1|chrUn_random (89017731-89017611) | |
| 7-120, gnl|xenTro1|scaffold_197 (1296912-1297046) | |
| 194-636, gnl|bosTau2|chr21 (47540217-47540658) | |
| 194-636, gnl|Hg17|chr1 (170558311-170558759) | |
| 194-636, gnl|Mm7|chr1 (161004307-161003878) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| hea (0.204499) | |
| med (0.116252) |