Ss1.1-rpigcb_12570.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAAAGGGGACATTGTCTTCAACATCTATCACTCCAAGAGGGCGCCACAGCCGCCCAAG AAGGACGTGCTGGGCGCGCACAGCGTGACCTCCCCGGGCGGGAACAACGTGCAGCTCATC GACCGCGCGTGGCAGCTGGGCCGGGACTACAGCATGGTGGAGTCGTCGCTGACCTGCCGG GAAGGGGAGAGCGTGCAGGGCTCCCACGTGACGCGGTGGCCGGGCTTCTACATCCTGCAG TGGAAGTTCCACAGCATGCCCGCGTGTGCCGCCACCAGCCTGCCCCGCGTGGACGACGTG CTGGCCTCCCTGCAGGTCTCCTCTCACAAGTGCAAGGTCATGTACTACACCGAGGTGATC GCCTCCGAGGACTTCAGAGGCTCCATGACCAGCCTGGAGTCCAGCCACAGCGGGTTCTCC CAGCTCAGTGCTGCCACCACCTCGTCCAGCCAGTCCCACTCCAGCTCCATGATCTCCAGG TAGTGCCCGGGGCGCCAGGACGGCCGCCCGCCTCGGACCTCCCGCCCGGCTGCCCGGCCG GTGGCCACTGCGCGCAGACTCCTCGCCCTCTAGGTAGCAGCTAGCTCTCCATAGTCCCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAAAGGGGACATTGTCTTCAACATCTATCACTCCAAGAGGGCGCCACAGCCGCCCAAG AAGGACGTGCTGGGCGCGCACAGCGTGACCTCCCCGGGCGGGAACAACGTGCAGCTCATC GACCGCGCGTGGCAGCTGGGCCGGGACTACAGCATGGTGGAGTCGTCGCTGACCTGCCGG GAAGGGGAGAGCGTGCAGGGCTCCCACGTGACGCGGTGGCCGGGCTTCTACATCCTGCAG TGGAAGTTCCACAGCATGCCCGCGTGTGCCGCCACCAGCCTGCCCCGCGTGGACGACGTG CTGGCCTCCCTGCAGGTCTCCTCTCACAAGTGCAAGGTCATGTACTACACCGAGGTGATC GCCTCCGAGGACTTCAGAGGCTCCATGACCAGCCTGGAGTCCAGCCACAGCGGGTTCTCC CAGCTCAGTGCTGCCACCACCTCGTCCAGCCAGTCCCACTCCAGCTCCATGATCTCCAGG TAGTGCCCGGGGCGCCAGGACGGCCGCCCGCCTCGGACCTCCCGCCCGGCTGCCCGGCCG GTGGCCACTGCGCGCAGACTCCTCGCCCTCTAGGTAGCAGCTAGCTCTCCATAGTCCCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 196-377, gnl|bosTau2|chr19 (48666287-48666106) | |
| 196-377, gnl|canFam2|chr9 (6684290-6684106) | |
| 196-377, gnl|canFam2|chr9 (6684288-6684111) | |
| 196-377, gnl|danRer3|chrNA (240650359-240650175) | |
| 196-377, gnl|danRer3|chrNA (240650357-240650181) | |
| 196-377, gnl|dasNov1|scaffold_129741 (860-1042) | |
| 196-377, gnl|dasNov1|scaffold_129741 (863-1034) | |
| 196-377, gnl|echTel1|scaffold_278324 (12351-12535) | |
| 196-377, gnl|echTel1|scaffold_278324 (12352-12527) | |
| 196-377, gnl|fr1|chrUn (153571482-153571298) | |
| 196-377, gnl|fr1|chrUn (153571480-153571304) | |
| 196-377, gnl|galGal2|chr18 (3914075-3913893) | |
| 196-377, gnl|galGal2|chr18 (3914075-3913898) | |
| 196-377, gnl|hg17|chr11 (43877401-43877581) | |
| 196-377, gnl|hg17|chr17 (72720988-72721172) | |
| 196-377, gnl|Hg17|chr17 (72720988-72721169) | |
| 196-377, gnl|loxAfr1|scaffold_41949 (7460-7276) | |
| 196-377, gnl|loxAfr1|scaffold_41949 (7459-7284) | |
| 196-377, gnl|mm7|chr11 (117265403-117265587) | |
| 196-377, gnl|mm7|chr11 (117265402-117265582) | |
| 196-377, gnl|Mm7|chr11 (117265403-117265584) | |
| 196-377, gnl|monDom2|scaffold_18 (4831366-4831548) | |
| 196-377, gnl|monDom2|scaffold_18 (4831366-4831539) | |
| 196-377, gnl|oryCun1|scaffold_112990 (12344-12519) | |
| 196-377, gnl|oryCun1|scaffold_112990 (12340-12521) | |
| 196-377, gnl|panTro1|chr19 (76105250-76105434) | |
| 196-377, gnl|panTro1|chr9 (44372885-44373065) | |
| 196-377, gnl|rheMac2|chr14 (28211999-28211824) | |
| 196-377, gnl|rheMac2|chr16 (72549318-72549502) | |
| 196-377, gnl|rn3|chr10 (107279429-107279613) | |
| 196-377, gnl|rn3|chr10 (107279428-107279608) | |
| 196-377, gnl|tetNig1|chrUn_random (39660710-39660524) | |
| 196-377, gnl|tetNig1|chrUn_random (7910709-7910533) | |
| 196-377, gnl|xenTro1|scaffold_135 (1510012-1509830) | |
| 196-377, gnl|xenTro1|scaffold_135 (1510013-1509835) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 196-377, gnl|bosTau2|chr19 (48666287-48666106) | |
| 196-377, gnl|canFam2|chr9 (6684290-6684106) | |
| 196-377, gnl|canFam2|chr9 (6684288-6684111) | |
| 196-377, gnl|danRer3|chrNA (240650359-240650175) | |
| 196-377, gnl|danRer3|chrNA (240650357-240650181) | |
| 196-377, gnl|dasNov1|scaffold_129741 (860-1042) | |
| 196-377, gnl|dasNov1|scaffold_129741 (863-1034) | |
| 196-377, gnl|echTel1|scaffold_278324 (12351-12535) | |
| 196-377, gnl|echTel1|scaffold_278324 (12352-12527) | |
| 196-377, gnl|fr1|chrUn (153571482-153571298) | |
| 196-377, gnl|fr1|chrUn (153571480-153571304) | |
| 196-377, gnl|galGal2|chr18 (3914075-3913893) | |
| 196-377, gnl|galGal2|chr18 (3914075-3913898) | |
| 196-377, gnl|hg17|chr11 (43877401-43877581) | |
| 196-377, gnl|hg17|chr17 (72720988-72721172) | |
| 196-377, gnl|Hg17|chr17 (72720988-72721169) | |
| 196-377, gnl|loxAfr1|scaffold_41949 (7460-7276) | |
| 196-377, gnl|loxAfr1|scaffold_41949 (7459-7284) | |
| 196-377, gnl|mm7|chr11 (117265403-117265587) | |
| 196-377, gnl|mm7|chr11 (117265402-117265582) | |
| 196-377, gnl|Mm7|chr11 (117265403-117265584) | |
| 196-377, gnl|monDom2|scaffold_18 (4831366-4831548) | |
| 196-377, gnl|monDom2|scaffold_18 (4831366-4831539) | |
| 196-377, gnl|oryCun1|scaffold_112990 (12344-12519) | |
| 196-377, gnl|oryCun1|scaffold_112990 (12340-12521) | |
| 196-377, gnl|panTro1|chr19 (76105250-76105434) | |
| 196-377, gnl|panTro1|chr9 (44372885-44373065) | |
| 196-377, gnl|rheMac2|chr14 (28211999-28211824) | |
| 196-377, gnl|rheMac2|chr16 (72549318-72549502) | |
| 196-377, gnl|rn3|chr10 (107279429-107279613) | |
| 196-377, gnl|rn3|chr10 (107279428-107279608) | |
| 196-377, gnl|tetNig1|chrUn_random (39660710-39660524) | |
| 196-377, gnl|tetNig1|chrUn_random (7910709-7910533) | |
| 196-377, gnl|xenTro1|scaffold_135 (1510012-1509830) | |
| 196-377, gnl|xenTro1|scaffold_135 (1510013-1509835) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| cty (0.10408) |