Ss1.1-rpigcb_12578.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCGCTTTATGAACCACAGTTGTAACCCAAACTGTGAAACACAAAAGTGGACAGTGAATG GCGATGTTCGAGTTGGACTTTTTGCTCTTTGTGACATTCCTGCAGGGATGGAGTTAACAT TTAATTACAACCTGGACTGTCTGGGCAATGGCAGGACGGAGTGCCACTGCGGGGCTGAGA ACTGCAGTGGTTTCCTCGGTGTTCGGCCGAAGTCGGCATGTGCATCAACAACTGAAGAAA AGGCAAAAAATGCTAAGTTAAAGCAGAAGAGACGGAAAGTCAAAACAGAGCCCAAGCAGC TGCACGAAGATTACTGTTTCCAGTGTGGAGACGGTGGAGAGCTGGTCATGTGCGACAGGA AGGACTGCCCCAAAGCCTACCACCTCCTCTGCCTTAACCTCCCTCAGCCGCCCTACGGAA AGTGGGAGTGCCCGTGGCACCAGTGCGACGAGTGCAGCAGCGCAGCTGTCTCCTTCTGCG AGTTCTGCCCGCGCTCATTCTGTAAAGATCACGACAAGGGGGCGCTGGTGCCCTCGGCAC TGGAAGGCCGACTCTGCTGCTCTGAACATGACCCTGTGTCTCCCGTGTCACCGGAGTACT GGAGCAAGATCAAGTGTAAACTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCGCTTTATGAACCACAGTTGTAACCCAAACTGTGAAACACAAAAGTGGACAGTGAATG GCGATGTTCGAGTTGGACTTTTTGCTCTTTGTGACATTCCTGCAGGGATGGAGTTAACAT TTAATTACAACCTGGACTGTCTGGGCAATGGCAGGACGGAGTGCCACTGCGGGGCTGAGA ACTGCAGTGGTTTCCTCGGTGTTCGGCCGAAGTCGGCATGTGCATCAACAACTGAAGAAA AGGCAAAAAATGCTAAGTTAAAGCAGAAGAGACGGAAAGTCAAAACAGAGCCCAAGCAGC TGCACGAAGATTACTGTTTCCAGTGTGGAGACGGTGGAGAGCTGGTCATGTGCGACAGGA AGGACTGCCCCAAAGCCTACCACCTCCTCTGCCTTAACCTCCCTCAGCCGCCCTACGGAA AGTGGGAGTGCCCGTGGCACCAGTGCGACGAGTGCAGCAGCGCAGCTGTCTCCTTCTGCG AGTTCTGCCCGCGCTCATTCTGTAAAGATCACGACAAGGGGGCGCTGGTGCCCTCGGCAC TGGAAGGCCGACTCTGCTGCTCTGAACATGACCCTGTGTCTCCCGTGTCACCGGAGTACT GGAGCAAGATCAAGTGTAAACTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-106, gnl|bosTau2|chr27 (21658875-21658770) | |
| 1-106, gnl|canFam2|chr16 (30170591-30170418) | |
| 1-106, gnl|danRer3|chr10 (11833929-11834095) | |
| 1-106, gnl|dasNov1|scaffold_7981 (38451-38267) | |
| 1-106, gnl|echTel1|scaffold_239845 (139-4) | |
| 1-106, gnl|fr1|chrUn (1349399-1349224) | |
| 1-106, gnl|galGal2|chrUn (478977-479144) | |
| 1-106, gnl|hg17|chr8 (38256209-38256377) | |
| 1-106, gnl|Hg17|chr8 (38256319-38256214) | |
| 1-106, gnl|loxAfr1|scaffold_51412 (6242-6388) | |
| 1-106, gnl|mm7|chr8 (24465698-24465519) | |
| 1-106, gnl|Mm7|chr8 (24465587-24465692) | |
| 1-106, gnl|monDom2|scaffold_1 (84623546-84623381) | |
| 1-106, gnl|oryCun1|scaffold_148014 (6761-6929) | |
| 1-106, gnl|panTro1|chr7 (39638430-39638598) | |
| 1-106, gnl|rheMac2|chr8 (38734586-38734754) | |
| 1-106, gnl|rn3|chr16 (70739187-70739354) | |
| 1-106, gnl|tetNig1|chr12 (5920989-5920825) | |
| 1-106, gnl|xenTro1|scaffold_190 (1740980-1740822) | |
| 211-418, gnl|bosTau2|chr27 (21657038-21656831) | |
| 211-418, gnl|Hg17|chr8 (38253177-38252970) | |
| 211-418, gnl|Mm7|chr8 (24469843-24470047) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-106, gnl|bosTau2|chr27 (21658875-21658770) | |
| 1-106, gnl|canFam2|chr16 (30170591-30170418) | |
| 1-106, gnl|danRer3|chr10 (11833929-11834095) | |
| 1-106, gnl|dasNov1|scaffold_7981 (38451-38267) | |
| 1-106, gnl|echTel1|scaffold_239845 (139-4) | |
| 1-106, gnl|fr1|chrUn (1349399-1349224) | |
| 1-106, gnl|galGal2|chrUn (478977-479144) | |
| 1-106, gnl|hg17|chr8 (38256209-38256377) | |
| 1-106, gnl|Hg17|chr8 (38256319-38256214) | |
| 1-106, gnl|loxAfr1|scaffold_51412 (6242-6388) | |
| 1-106, gnl|mm7|chr8 (24465698-24465519) | |
| 1-106, gnl|Mm7|chr8 (24465587-24465692) | |
| 1-106, gnl|monDom2|scaffold_1 (84623546-84623381) | |
| 1-106, gnl|oryCun1|scaffold_148014 (6761-6929) | |
| 1-106, gnl|panTro1|chr7 (39638430-39638598) | |
| 1-106, gnl|rheMac2|chr8 (38734586-38734754) | |
| 1-106, gnl|rn3|chr16 (70739187-70739354) | |
| 1-106, gnl|tetNig1|chr12 (5920989-5920825) | |
| 1-106, gnl|xenTro1|scaffold_190 (1740980-1740822) | |
| 211-418, gnl|bosTau2|chr27 (21657038-21656831) | |
| 211-418, gnl|Hg17|chr8 (38253177-38252970) | |
| 211-418, gnl|Mm7|chr8 (24469843-24470047) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |