Ss1.1-rpigcb_12596.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTGGAAAGCCTGTCATCTGTTGTGAAGGAGAGCTGGTGTTGACTTGAGGCAACAGAGTT GGTGGTCTGGTGCCCATTATCCTGTGTTAAGAGCAAGTGGTCTCTGGGTGTTTGGACTCT GACTGGTGCTTCTCTGGCGCTGCTAAAGGGAGAAGAGCACAAGCTGTGCTCCTTTTTCCA GCTCAAGCTGCTGAACCTAGGAAGATCCCTGAGGCCCAGCTTGGACTTCCTCCTGGTTTT CTCTCCCATGGTAGATTTTAAAAGTAGGGAGTTTTTCTCATTCATCTTTCCATTTGGGTT TGAAACAGCTGGACATGCAGGCCCTCGGCCGCCTGGCTCAGGTGTGCCGTTGGCTGCGGC GCTTCACCAGCTGCGACCTGCTCTGGCGCCGGATAGCCCGGGCCTCGCTCAACTCTGGCT TCACGCGGCTCGGCACTGACCTGATGGCCAGTGTACCAGTGAAGGAGCGGGTGAAGGTTT CTCAGAACTGGAGGTTGGGGCGCTGCCGAGAGGGGATTCTGCTGAAGTGGAGATGCAGTC AGATGCCCTGGATGCAGCTAGAGGGTGATTCTCTGTACATATCCCAAGCTAATTTCATCC TGGCCTATCAGTTCCGCCCAGATGGTGCCAGCTTGAACCGGAGACCCCTGGGAGTCTTTG CCGGGCATGATGAGGACGTTTGCCACTTTGTGCTGGCCAATTCGCATATTATCAGTGCAG GAGGAGATGGAAAGATTGGTGTTCATAAGATTCATAGCACCTTCACTGTCAAGTACTCAG CCCATGAACAGGAGGTAAACTGTGTGGATTGCAAAGGAGGCATCATTGTGAGTGGCTCCA GGGACAGGACGGCCAAGCTCTTTTGTGACAGGGACAGCTTGTTGTGGGCACTTCTCACCC CTAAGAATCTGGGACCTCAACAGGCTTTTGGGTTGACATACTTTTCAGTTCCATGGGATT CATGCCTGGGAATACAACTGCCAGGTCATTTGTGGGCAGCTGATGACACACCTGGGCAGT GACTTTCCCCCAGGGGCTGGGGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTGGAAAGCCTGTCATCTGTTGTGAAGGAGAGCTGGTGTTGACTTGAGGCAACAGAGTT GGTGGTCTGGTGCCCATTATCCTGTGTTAAGAGCAAGTGGTCTCTGGGTGTTTGGACTCT GACTGGTGCTTCTCTGGCGCTGCTAAAGGGAGAAGAGCACAAGCTGTGCTCCTTTTTCCA GCTCAAGCTGCTGAACCTAGGAAGATCCCTGAGGCCCAGCTTGGACTTCCTCCTGGTTTT CTCTCCCATGGTAGATTTTAAAAGTAGGGAGTTTTTCTCATTCATCTTTCCATTTGGGTT TGAAACAGCTGGACATGCAGGCCCTCGGCCGCCTGGCTCAGGTGTGCCGTTGGCTGCGGC GCTTCACCAGCTGCGACCTGCTCTGGCGCCGGATAGCCCGGGCCTCGCTCAACTCTGGCT TCACGCGGCTCGGCACTGACCTGATGGCCAGTGTACCAGTGAAGGAGCGGGTGAAGGTTT CTCAGAACTGGAGGTTGGGGCGCTGCCGAGAGGGGATTCTGCTGAAGTGGAGATGCAGTC AGATGCCCTGGATGCAGCTAGAGGGTGATTCTCTGTACATATCCCAAGCTAATTTCATCC TGGCCTATCAGTTCCGCCCAGATGGTGCCAGCTTGAACCGGAGACCCCTGGGAGTCTTTG CCGGGCATGATGAGGACGTTTGCCACTTTGTGCTGGCCAATTCGCATATTATCAGTGCAG GAGGAGATGGAAAGATTGGTGTTCATAAGATTCATAGCACCTTCACTGTCAAGTACTCAG CCCATGAACAGGAGGTAAACTGTGTGGATTGCAAAGGAGGCATCATTGTGAGTGGCTCCA GGGACAGGACGGCCAAGCTCTTTTGTGACAGGGACAGCTTGTTGTGGGCACTTCTCACCC CTAAGAATCTGGGACCTCAACAGGCTTTTGGGTTGACATACTTTTCAGTTCCATGGGATT CATGCCTGGGAATACAACTGCCAGGTCATTTGTGGGCAGCTGATGACACACCTGGGCAGT GACTTTCCCCCAGGGGCTGGGGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 4-296, gnl|bosTau2|chr26 (16583838-16583554) | |
| 4-296, gnl|Hg17|chr10 (103454387-103454085) | |
| 4-296, gnl|Mm7|chr19 (45566751-45566367) | |
| 309-443, gnl|bosTau2|chr26 (16573300-16573166) | |
| 309-443, gnl|Hg17|chr10 (103444261-103444127) | |
| 309-443, gnl|Mm7|chr19 (45556812-45556678) | |
| 534-724, gnl|bosTau2|chr26 (16553466-16553276) | |
| 534-724, gnl|canFam2|chr28 (17274581-17274795) | |
| 534-724, gnl|danRer3|chr13 (29111928-29112150) | |
| 534-724, gnl|echTel1|scaffold_246304 (5169-5383) | |
| 534-724, gnl|galGal2|chr6 (21857114-21856917) | |
| 534-724, gnl|hg17|chr10 (103423227-103423441) | |
| 534-724, gnl|Hg17|chr10 (103423425-103423235) | |
| 534-724, gnl|loxAfr1|scaffold_43922 (14048-14262) | |
| 534-724, gnl|mm7|chr19 (45533158-45533354) | |
| 534-724, gnl|Mm7|chr19 (45533356-45533166) | |
| 534-724, gnl|monDom2|scaffold_14 (61792582-61792367) | |
| 534-724, gnl|oryCun1|scaffold_185142 (2720-2934) | |
| 534-724, gnl|panTro1|chr8 (105177740-105177954) | |
| 534-724, gnl|rheMac2|chr9 (101301718-101301932) | |
| 534-724, gnl|rn3|chr1 (251109288-251109484) | |
| 534-724, gnl|tetNig1|chrUn_random (53984688-53984884) | |
| 534-724, gnl|xenTro1|scaffold_475 (83712-83497) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-296, gnl|bosTau2|chr26 (16583838-16583554) | |
| 4-296, gnl|Hg17|chr10 (103454387-103454085) | |
| 4-296, gnl|Mm7|chr19 (45566751-45566367) | |
| 309-443, gnl|bosTau2|chr26 (16573300-16573166) | |
| 309-443, gnl|Hg17|chr10 (103444261-103444127) | |
| 309-443, gnl|Mm7|chr19 (45556812-45556678) | |
| 534-724, gnl|bosTau2|chr26 (16553466-16553276) | |
| 534-724, gnl|canFam2|chr28 (17274581-17274795) | |
| 534-724, gnl|danRer3|chr13 (29111928-29112150) | |
| 534-724, gnl|echTel1|scaffold_246304 (5169-5383) | |
| 534-724, gnl|galGal2|chr6 (21857114-21856917) | |
| 534-724, gnl|hg17|chr10 (103423227-103423441) | |
| 534-724, gnl|Hg17|chr10 (103423425-103423235) | |
| 534-724, gnl|loxAfr1|scaffold_43922 (14048-14262) | |
| 534-724, gnl|mm7|chr19 (45533158-45533354) | |
| 534-724, gnl|Mm7|chr19 (45533356-45533166) | |
| 534-724, gnl|monDom2|scaffold_14 (61792582-61792367) | |
| 534-724, gnl|oryCun1|scaffold_185142 (2720-2934) | |
| 534-724, gnl|panTro1|chr8 (105177740-105177954) | |
| 534-724, gnl|rheMac2|chr9 (101301718-101301932) | |
| 534-724, gnl|rn3|chr1 (251109288-251109484) | |
| 534-724, gnl|tetNig1|chrUn_random (53984688-53984884) | |
| 534-724, gnl|xenTro1|scaffold_475 (83712-83497) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |