Ss1.1-rpigcb_12763.5
|
TGGACGGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTATTTTTACCGGGACTAGCGG
AAATCAAAATGCTTTATGAACAGCTGCAGTCTAATTCTCTTTTTAACAACAGACGTAGTA
ATCGATGTGTTGTTCACCCACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGGCTGTGT
TTGTAAAACCTCCTGTGGGTGTAACTAAGATTATAATTTCCACCAACATTGCTGAGACAT
CCATAACCATCGATGATGTCGTCTATGTCATCGATTCTGGGAAAATGAAAGAAAAGAGAT
ATGATGCCAGTAAAGGGATGGAAAGTTTAGAGGATACTTTTGTCTCTCAAGCCAATGCCC
TGCAAAGAAAAGGTCGGGCAGGTCGTGTCACGTCTGGAGTATGCTTCCATTTATTCACCA
GCCATCACTTCAATCACCAACTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGACGGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTATTTTTACCGGGACTAGCGG
AAATCAAAATGCTTTATGAACAGCTGCAGTCTAATTCTCTTTTTAACAACAGACGTAGTA
ATCGATGTGTTGTTCACCCACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGGCTGTGT
TTGTAAAACCTCCTGTGGGTGTAACTAAGATTATAATTTCCACCAACATTGCTGAGACAT
CCATAACCATCGATGATGTCGTCTATGTCATCGATTCTGGGAAAATGAAAGAAAAGAGAT
ATGATGCCAGTAAAGGGATGGAAAGTTTAGAGGATACTTTTGTCTCTCAAGCCAATGCCC
TGCAAAGAAAAGGTCGGGCAGGTCGTGTCACGTCTGGAGTATGCTTCCATTTATTCACCA
GCCATCACTTCAATCACCAACTTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
124-302, gnl|bosTau2|chr11 (15938738-15938916) |
|
124-302, gnl|canFam2|chr17 (33976686-33976801) |
|
124-302, gnl|dasNov1|scaffold_207997 (2621-2503) |
|
124-302, gnl|echTel1|scaffold_310270 (80864-80979) |
|
124-302, gnl|fr1|chrUn (280164541-280164426) |
|
124-302, gnl|galGal2|chrUn (159233954-159234069) |
|
124-302, gnl|hg17|chr2 (38965307-38965422) |
|
124-302, gnl|Hg17|chr2 (38965483-38965305) |
|
124-302, gnl|loxAfr1|scaffold_10889 (31332-31217) |
|
124-302, gnl|mm7|chr17 (78549976-78550091) |
|
124-302, gnl|Mm7|chr17 (78550152-78549975) |
|
124-302, gnl|monDom2|scaffold_23 (42066772-42066887) |
|
124-302, gnl|oryCun1|scaffold_173308 (7219-7104) |
|
124-302, gnl|panTro1|chr12 (40460246-40460361) |
|
124-302, gnl|rheMac2|chr13 (38812327-38812442) |
|
124-302, gnl|rn3|chr6 (3156799-3156914) |
|
124-302, gnl|tetNig1|chr19 (4803077-4803192) |
|
124-302, gnl|xenTro1|scaffold_41 (571403-571518) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
124-302, gnl|bosTau2|chr11 (15938738-15938916) |
|
124-302, gnl|canFam2|chr17 (33976686-33976801) |
|
124-302, gnl|dasNov1|scaffold_207997 (2621-2503) |
|
124-302, gnl|echTel1|scaffold_310270 (80864-80979) |
|
124-302, gnl|fr1|chrUn (280164541-280164426) |
|
124-302, gnl|galGal2|chrUn (159233954-159234069) |
|
124-302, gnl|hg17|chr2 (38965307-38965422) |
|
124-302, gnl|Hg17|chr2 (38965483-38965305) |
|
124-302, gnl|loxAfr1|scaffold_10889 (31332-31217) |
|
124-302, gnl|mm7|chr17 (78549976-78550091) |
|
124-302, gnl|Mm7|chr17 (78550152-78549975) |
|
124-302, gnl|monDom2|scaffold_23 (42066772-42066887) |
|
124-302, gnl|oryCun1|scaffold_173308 (7219-7104) |
|
124-302, gnl|panTro1|chr12 (40460246-40460361) |
|
124-302, gnl|rheMac2|chr13 (38812327-38812442) |
|
124-302, gnl|rn3|chr6 (3156799-3156914) |
|
124-302, gnl|tetNig1|chr19 (4803077-4803192) |
|
124-302, gnl|xenTro1|scaffold_41 (571403-571518) |
