Ss1.1-rpigcb_13040.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACTGTGGAGGGCTGCGGGAGGTGGAGGTGACTGCGTGCCTGGTGTGGAAGGACTGGCC TCACCGAGTTCACCCCCACAGCCTGGTGGGCAAGGACTGCACGGACGGCGTCTGCAGGGT GCGGCTGCGGCCTCATGTCAGCCCCCGGCACAGCTTTAACAACCTGGGCATCCAGTGCGT GAGGAAGAAGGAGATCGAGGCCGCCATCGAGCGGAAGATTCAGCTGGGCATCGACCCCTA CAACGCTGGGTCCTTGAAGAACCATCAGGAGGTGGACATGAACGTCGTGAGGATCTGCTT CCAGGCCTCGTACAGGGACCCACAAGGACAGATGCGCCGGATGGACCCTGTGCTCTCTGA GCCCGTCTACGACAAGAAGTCCACAAACACATCAGAGCTGCGGATCTGCCGAATCAACAA GGAGAGCGGGCCATGCACGGGTGGCGAGGAGCTCTACCTGCTGTGTGACAAGGTGCAGAA AGAGGACATCTCAGTGGTGTTCAGCAGAGCCTCCTGGGAAGGCCGGGCGGACTTCTCCCA GGCCGACGTGCACCGCCAGATCGCCATCGTGTTCAAGACACCGCCCTACGAGGACCTGGA GATCGTTGAACCGGTGACAGTGAACGTGTTCCTGCAGCGGCTCACGGACGGGGTCTGCAG TGAGCCTCTGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACTGTGGAGGGCTGCGGGAGGTGGAGGTGACTGCGTGCCTGGTGTGGAAGGACTGGCC TCACCGAGTTCACCCCCACAGCCTGGTGGGCAAGGACTGCACGGACGGCGTCTGCAGGGT GCGGCTGCGGCCTCATGTCAGCCCCCGGCACAGCTTTAACAACCTGGGCATCCAGTGCGT GAGGAAGAAGGAGATCGAGGCCGCCATCGAGCGGAAGATTCAGCTGGGCATCGACCCCTA CAACGCTGGGTCCTTGAAGAACCATCAGGAGGTGGACATGAACGTCGTGAGGATCTGCTT CCAGGCCTCGTACAGGGACCCACAAGGACAGATGCGCCGGATGGACCCTGTGCTCTCTGA GCCCGTCTACGACAAGAAGTCCACAAACACATCAGAGCTGCGGATCTGCCGAATCAACAA GGAGAGCGGGCCATGCACGGGTGGCGAGGAGCTCTACCTGCTGTGTGACAAGGTGCAGAA AGAGGACATCTCAGTGGTGTTCAGCAGAGCCTCCTGGGAAGGCCGGGCGGACTTCTCCCA GGCCGACGTGCACCGCCAGATCGCCATCGTGTTCAAGACACCGCCCTACGAGGACCTGGA GATCGTTGAACCGGTGACAGTGAACGTGTTCCTGCAGCGGCTCACGGACGGGGTCTGCAG TGAGCCTCTGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-153, gnl|bosTau2|chr18 (38804400-38804248) | |
| 1-153, gnl|Hg17|chr19 (50217156-50217308) | |
| 1-153, gnl|Mm7|chr7 (17300288-17300136) | |
| 235-377, gnl|bosTau2|chr18 (38802554-38802414) | |
| 235-377, gnl|canFam2|chr1 (113339696-113339547) | |
| 235-377, gnl|danRer3|chr15 (14065699-14065846) | |
| 235-377, gnl|dasNov1|scaffold_132757 (8320-8470) | |
| 235-377, gnl|echTel1|scaffold_91854 (846-1012) | |
| 235-377, gnl|fr1|chrUn (87381036-87380889) | |
| 235-377, gnl|hg17|chr19 (50220694-50220844) | |
| 235-377, gnl|Hg17|chr19 (50220694-50220835) | |
| 235-377, gnl|loxAfr1|scaffold_120381 (1353-1502) | |
| 235-377, gnl|mm7|chr7 (17298074-17297926) | |
| 235-377, gnl|Mm7|chr7 (17298073-17297933) | |
| 235-377, gnl|monDom2|scaffold_221 (106087-105937) | |
| 235-377, gnl|oryCun1|scaffold_101430 (589-441) | |
| 235-377, gnl|panTro1|chr20 (47361158-47361308) | |
| 235-377, gnl|rheMac2|chr19 (51445227-51445377) | |
| 235-377, gnl|rn3|chr1 (78996962-78996814) | |
| 235-377, gnl|tetNig1|chr16 (1650937-1650787) | |
| 481-672, gnl|bosTau2|chr18 (38798641-38798450) | |
| 481-672, gnl|Hg17|chr19 (50227630-50227821) | |
| 481-672, gnl|Mm7|chr7 (17295096-17294905) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-153, gnl|bosTau2|chr18 (38804400-38804248) | |
| 1-153, gnl|Hg17|chr19 (50217156-50217308) | |
| 1-153, gnl|Mm7|chr7 (17300288-17300136) | |
| 235-377, gnl|bosTau2|chr18 (38802554-38802414) | |
| 235-377, gnl|canFam2|chr1 (113339696-113339547) | |
| 235-377, gnl|danRer3|chr15 (14065699-14065846) | |
| 235-377, gnl|dasNov1|scaffold_132757 (8320-8470) | |
| 235-377, gnl|echTel1|scaffold_91854 (846-1012) | |
| 235-377, gnl|fr1|chrUn (87381036-87380889) | |
| 235-377, gnl|hg17|chr19 (50220694-50220844) | |
| 235-377, gnl|Hg17|chr19 (50220694-50220835) | |
| 235-377, gnl|loxAfr1|scaffold_120381 (1353-1502) | |
| 235-377, gnl|mm7|chr7 (17298074-17297926) | |
| 235-377, gnl|Mm7|chr7 (17298073-17297933) | |
| 235-377, gnl|monDom2|scaffold_221 (106087-105937) | |
| 235-377, gnl|oryCun1|scaffold_101430 (589-441) | |
| 235-377, gnl|panTro1|chr20 (47361158-47361308) | |
| 235-377, gnl|rheMac2|chr19 (51445227-51445377) | |
| 235-377, gnl|rn3|chr1 (78996962-78996814) | |
| 235-377, gnl|tetNig1|chr16 (1650937-1650787) | |
| 481-672, gnl|bosTau2|chr18 (38798641-38798450) | |
| 481-672, gnl|Hg17|chr19 (50227630-50227821) | |
| 481-672, gnl|Mm7|chr7 (17295096-17294905) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| cty (0.10408) |