Ss1.1-rpigcb_14258.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGCGAGAGGATGGACGGCTTAGTCGCTGCCTGCTCCGCGCGGCTGCTGCAGCAGGAG AAAGAGATTAAGTTTCTGACTGCTGAAATTGATCGGTTGAAAAATTGTAGCTGTTCAGAA GCTTCTTCAAATTTGGAGCGATTGCGGGAGGAAAATTTAAAATTAAAGTATCGGCTGAAT ATCCTTCAAAAAAGTCTTCAAGCAGAAAGGAACAAACCAAGTAAAAATATGATTAACATC ATTAGTGGCCTACAAGAGGTCTTTGGTTGTGCCATTAAAGCTGCGTATCCAGATTTGGAA AACCCTCCACTGATAGTGACACCAAGTCAACAGCCCAAGTTCGGGGACTATCAGTGTAAT AGTGCCATGGGCATTTCTCAGATGCTCAAAACAAAGGAACAGAAAGTTAACCCAAGAGAA ATTGCTGAAAACATTACCAAAAATCTTCCAGACAATGAATATATTGAAAAAGTTGAAATT GCTGGTCCCGGTTTCATTAATATTCACTTAAAGAAAAGCTTTGTATCACAACAGCTGACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGCGAGAGGATGGACGGCTTAGTCGCTGCCTGCTCCGCGCGGCTGCTGCAGCAGGAG AAAGAGATTAAGTTTCTGACTGCTGAAATTGATCGGTTGAAAAATTGTAGCTGTTCAGAA GCTTCTTCAAATTTGGAGCGATTGCGGGAGGAAAATTTAAAATTAAAGTATCGGCTGAAT ATCCTTCAAAAAAGTCTTCAAGCAGAAAGGAACAAACCAAGTAAAAATATGATTAACATC ATTAGTGGCCTACAAGAGGTCTTTGGTTGTGCCATTAAAGCTGCGTATCCAGATTTGGAA AACCCTCCACTGATAGTGACACCAAGTCAACAGCCCAAGTTCGGGGACTATCAGTGTAAT AGTGCCATGGGCATTTCTCAGATGCTCAAAACAAAGGAACAGAAAGTTAACCCAAGAGAA ATTGCTGAAAACATTACCAAAAATCTTCCAGACAATGAATATATTGAAAAAGTTGAAATT GCTGGTCCCGGTTTCATTAATATTCACTTAAAGAAAAGCTTTGTATCACAACAGCTGACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 56-192, gnl|bosTau2|chr7 (53089054-53088918) | |
| 56-192, gnl|canFam2|chr4 (46456972-46456817) | |
| 56-192, gnl|danRer3|chr21 (26099747-26099600) | |
| 56-192, gnl|dasNov1|scaffold_1618 (18197-18045) | |
| 56-192, gnl|echTel1|scaffold_281747 (2978-3133) | |
| 56-192, gnl|fr1|chrUn (134443551-134443704) | |
| 56-192, gnl|galGal2|chr13 (4806405-4806559) | |
| 56-192, gnl|hg17|chr5 (167848171-167848326) | |
| 56-192, gnl|Hg17|chr5 (167848183-167848319) | |
| 56-192, gnl|loxAfr1|scaffold_30042 (26637-26792) | |
| 56-192, gnl|mm7|chr11 (35687035-35686881) | |
| 56-192, gnl|Mm7|chr11 (35687022-35686886) | |
| 56-192, gnl|monDom2|scaffold_6 (33615088-33614927) | |
| 56-192, gnl|oryCun1|scaffold_202828 (20171-20017) | |
| 56-192, gnl|panTro1|chr4 (175092409-175092564) | |
| 56-192, gnl|rheMac2|chr6 (164862867-164863021) | |
| 56-192, gnl|rn3|chr10 (20745607-20745453) | |
| 56-192, gnl|tetNig1|chrUn_random (84562489-84562338) | |
| 56-192, gnl|xenTro1|scaffold_350 (16543-16698) | |
| 193-381, gnl|bosTau2|chr7 (53086004-53085816) | |
| 193-381, gnl|Hg17|chr5 (167852242-167852430) | |
| 193-381, gnl|Mm7|chr11 (35682527-35682339) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 56-192, gnl|bosTau2|chr7 (53089054-53088918) | |
| 56-192, gnl|canFam2|chr4 (46456972-46456817) | |
| 56-192, gnl|danRer3|chr21 (26099747-26099600) | |
| 56-192, gnl|dasNov1|scaffold_1618 (18197-18045) | |
| 56-192, gnl|echTel1|scaffold_281747 (2978-3133) | |
| 56-192, gnl|fr1|chrUn (134443551-134443704) | |
| 56-192, gnl|galGal2|chr13 (4806405-4806559) | |
| 56-192, gnl|hg17|chr5 (167848171-167848326) | |
| 56-192, gnl|Hg17|chr5 (167848183-167848319) | |
| 56-192, gnl|loxAfr1|scaffold_30042 (26637-26792) | |
| 56-192, gnl|mm7|chr11 (35687035-35686881) | |
| 56-192, gnl|Mm7|chr11 (35687022-35686886) | |
| 56-192, gnl|monDom2|scaffold_6 (33615088-33614927) | |
| 56-192, gnl|oryCun1|scaffold_202828 (20171-20017) | |
| 56-192, gnl|panTro1|chr4 (175092409-175092564) | |
| 56-192, gnl|rheMac2|chr6 (164862867-164863021) | |
| 56-192, gnl|rn3|chr10 (20745607-20745453) | |
| 56-192, gnl|tetNig1|chrUn_random (84562489-84562338) | |
| 56-192, gnl|xenTro1|scaffold_350 (16543-16698) | |
| 193-381, gnl|bosTau2|chr7 (53086004-53085816) | |
| 193-381, gnl|Hg17|chr5 (167852242-167852430) | |
| 193-381, gnl|Mm7|chr11 (35682527-35682339) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| mas (0.210305) | |
| ssp (0.13552) | |
| clu (0.119646) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| ssp (0.13552) | |
| clu (0.119646) | |
| cty (0.10408) |