Ss1.1-rpigcb_14966.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGATGCATGCCAGGTTTCCACTGATTGGCAGAATTGAAGAGCACTACACATGGATCCCC AAAATCAACATGGCAGTGGCAGTTCATTAGTTGTGATCCAGCAGCCTGCTTTGGATAGCC GTCAGAGGCTAGACTATGAGAGGGAGATTCAGCCTGCTGCTATTTTGTCCTTAGACCAAA TCAAGGCCATCAGAGGCAGCAATGAATACACAGAAGGGCCGTCAGTGGTGAAAAGACCTG CTCCTCGGACAGCACCAAGACAAGAAAAGCATGAAAGGACTCACGAAATCATACCAATTA ATGTGAATAATAACTACGAGCATAGACCTACCAGCCACCTGGGCCATGCAGGACTCTCAA ATAATGCCAGAGGCCCCATATTGAGCAGATCAACCAGCACCGGAAGTGCAGCCAGTTCTG GGAGCAACAGCAGTGCCTCTTCCGAGCAGGGGCTATTAGGGAGGTCACCACCAACCAGAC CAGTTCCTGGTCATAGGTCTGAAAGGGCAATCCGGACCCAGCCCAAGCAGCTGATTGTGG ATGACTTAAAGGGTACCTTGAAAGAGGACCTGACACAGCACAAGTTCATTTGCGAACAGT GTGGGAAGTGCAAGTGTGGAGAATGCACAGCTCCCAGGACCCTGCCATCCTGTTTGGCCT GTAACCATCAGTGCCTTTGCTCTGCTGAGAGCATGGTGGAATATGGCACCTGCATGTGCT TAGTCAAGGGCATCTTCTACCACTGCTCCAATGACGATGAAGGGGATTCTTACTCGGATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGATGCATGCCAGGTTTCCACTGATTGGCAGAATTGAAGAGCACTACACATGGATCCCC AAAATCAACATGGCAGTGGCAGTTCATTAGTTGTGATCCAGCAGCCTGCTTTGGATAGCC GTCAGAGGCTAGACTATGAGAGGGAGATTCAGCCTGCTGCTATTTTGTCCTTAGACCAAA TCAAGGCCATCAGAGGCAGCAATGAATACACAGAAGGGCCGTCAGTGGTGAAAAGACCTG CTCCTCGGACAGCACCAAGACAAGAAAAGCATGAAAGGACTCACGAAATCATACCAATTA ATGTGAATAATAACTACGAGCATAGACCTACCAGCCACCTGGGCCATGCAGGACTCTCAA ATAATGCCAGAGGCCCCATATTGAGCAGATCAACCAGCACCGGAAGTGCAGCCAGTTCTG GGAGCAACAGCAGTGCCTCTTCCGAGCAGGGGCTATTAGGGAGGTCACCACCAACCAGAC CAGTTCCTGGTCATAGGTCTGAAAGGGCAATCCGGACCCAGCCCAAGCAGCTGATTGTGG ATGACTTAAAGGGTACCTTGAAAGAGGACCTGACACAGCACAAGTTCATTTGCGAACAGT GTGGGAAGTGCAAGTGTGGAGAATGCACAGCTCCCAGGACCCTGCCATCCTGTTTGGCCT GTAACCATCAGTGCCTTTGCTCTGCTGAGAGCATGGTGGAATATGGCACCTGCATGTGCT TAGTCAAGGGCATCTTCTACCACTGCTCCAATGACGATGAAGGGGATTCTTACTCGGATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-780, gnl|bosTau2|chr17 (19510841-19511620) | |
| 1-780, gnl|Hg17|chr4 (124680302-124681081) | |
| 1-780, gnl|Mm7|chr3 (37453341-37454102) | |
| 578-760, gnl|bosTau2|chr12 (31575129-31575311) | |
| 578-760, gnl|canFam2|chr22 (36316992-36317473) | |
| 578-760, gnl|danRer3|chr7 (23840761-23840258) | |
| 578-760, gnl|dasNov1|scaffold_7387 (36971-36490) | |
| 578-760, gnl|echTel1|scaffold_322955 (48465-48950) | |
| 578-760, gnl|fr1|chrUn (200776068-200775568) | |
| 578-760, gnl|galGal2|chr1 (145105200-145104719) | |
| 578-760, gnl|hg17|chr13 (79808916-79809397) | |
| 578-760, gnl|Hg17|chr13 (79809323-79809141) | |
| 578-760, gnl|loxAfr1|scaffold_3802 (30558-31039) | |
| 578-760, gnl|mm7|chr14 (100322511-100322992) | |
| 578-760, gnl|Mm7|chr14 (100322918-100322736) | |
| 578-760, gnl|monDom2|scaffold_8 (18787527-18788008) | |
| 578-760, gnl|oryCun1|scaffold_202349 (11862-11381) | |
| 578-760, gnl|panTro1|chr14 (62496302-62496783) | |
| 578-760, gnl|rheMac2|chr17 (60815804-60816285) | |
| 578-760, gnl|rn3|chr15 (90025563-90026044) | |
| 578-760, gnl|tetNig1|chr3 (4463150-4463641) | |
| 578-760, gnl|xenTro1|scaffold_141 (778449-777968) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-780, gnl|bosTau2|chr17 (19510841-19511620) | |
| 1-780, gnl|Hg17|chr4 (124680302-124681081) | |
| 1-780, gnl|Mm7|chr3 (37453341-37454102) | |
| 578-760, gnl|bosTau2|chr12 (31575129-31575311) | |
| 578-760, gnl|canFam2|chr22 (36316992-36317473) | |
| 578-760, gnl|danRer3|chr7 (23840761-23840258) | |
| 578-760, gnl|dasNov1|scaffold_7387 (36971-36490) | |
| 578-760, gnl|echTel1|scaffold_322955 (48465-48950) | |
| 578-760, gnl|fr1|chrUn (200776068-200775568) | |
| 578-760, gnl|galGal2|chr1 (145105200-145104719) | |
| 578-760, gnl|hg17|chr13 (79808916-79809397) | |
| 578-760, gnl|Hg17|chr13 (79809323-79809141) | |
| 578-760, gnl|loxAfr1|scaffold_3802 (30558-31039) | |
| 578-760, gnl|mm7|chr14 (100322511-100322992) | |
| 578-760, gnl|Mm7|chr14 (100322918-100322736) | |
| 578-760, gnl|monDom2|scaffold_8 (18787527-18788008) | |
| 578-760, gnl|oryCun1|scaffold_202349 (11862-11381) | |
| 578-760, gnl|panTro1|chr14 (62496302-62496783) | |
| 578-760, gnl|rheMac2|chr17 (60815804-60816285) | |
| 578-760, gnl|rn3|chr15 (90025563-90026044) | |
| 578-760, gnl|tetNig1|chr3 (4463150-4463641) | |
| 578-760, gnl|xenTro1|scaffold_141 (778449-777968) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| ebs (0.118301) |