Non-Coding RNA Search

Ss1.1-rpigcb_15252.5

Sequence:


               
               TTTCTAGCTTTTTGTTAAAACATAGATGCACGGCGGGAAGAATTAATAACGTAGTTTGAG
ACGCCTTAACCCACTAGGTTTGTTGAAAACAGCATACATTTTGGAGTCAGACATTTCTGA
GTTCCTATTTTGGCATCACTCTGTGACCTTGATACCTAACCTCTCTGAACTGCAGCTTCT
TTGTCACCTTAATAAGGATTATAAACTAACCCTTATGAAAGTGTGGTGAGAACTAAAGAA
GGTGACAAACATTGACAGTCTGGCACAGTGTCACACGTAAGAAATCACTCAACCAAGGTT
GGCTCCTTTCTGGCTGCCCCTTGTTGGCAGCTTGGTTTCCTTGAGAAGCCCTTGCAGCTA
CAGCCTCTGCCATCAGTCCAGGGATTCTTCTCTCGCCTTTCTCCACTTAGGCACATCCTC
ATGGGATGTAGTCTTGGCCGGGTGTGAGCATGGATGCTTGGGATCAATTCTGATTAAGAT
TCAGCCTTGCCCCAAGTTTCAATAAACTCTACCTGCAGAATGTCTTCAGAAATAAGTCCC
TGCCGAAGAAGAAGCCTATACATACATAAATCAATCCTCTGTACCCCTCTTACAAGTGAC
ATCTCTCTTGAACTACTGACTGCTCATAAACCTCGTATTTTACTCATAAACCTGCTTCCC
ACTTCATTCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTAGCTTTTTGTTAAAACATAGATGCACGGCGGGAAGAATTAATAACGTAGTTTGAG
ACGCCTTAACCCACTAGGTTTGTTGAAAACAGCATACATTTTGGAGTCAGACATTTCTGA
GTTCCTATTTTGGCATCACTCTGTGACCTTGATACCTAACCTCTCTGAACTGCAGCTTCT
TTGTCACCTTAATAAGGATTATAAACTAACCCTTATGAAAGTGTGGTGAGAACTAAAGAA
GGTGACAAACATTGACAGTCTGGCACAGTGTCACACGTAAGAAATCACTCAACCAAGGTT
GGCTCCTTTCTGGCTGCCCCTTGTTGGCAGCTTGGTTTCCTTGAGAAGCCCTTGCAGCTA
CAGCCTCTGCCATCAGTCCAGGGATTCTTCTCTCGCCTTTCTCCACTTAGGCACATCCTC
ATGGGATGTAGTCTTGGCCGGGTGTGAGCATGGATGCTTGGGATCAATTCTGATTAAGAT
TCAGCCTTGCCCCAAGTTTCAATAAACTCTACCTGCAGAATGTCTTCAGAAATAAGTCCC
TGCCGAAGAAGAAGCCTATACATACATAAATCAATCCTCTGTACCCCTCTTACAAGTGAC
ATCTCTCTTGAACTACTGACTGCTCATAAACCTCGTATTTTACTCATAAACCTGCTTCCC
ACTTCATTCTTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               9-543, gnl|bosTau2|chr5 (39281483-39282014)
               

               
               9-543, gnl|Hg17|chr4 (15528183-15528742)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-543, gnl|bosTau2|chr5 (39281483-39282014)
               

               
               9-543, gnl|Hg17|chr4 (15528183-15528742)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fhi (0.169578)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               cbl (0.114797)
               

               
               cty (0.10408)

	9-543, gnl\|bosTau2\|chr5 (39281483-39282014)
	9-543, gnl\|Hg17\|chr4 (15528183-15528742)