Non-Coding RNA Search

Ss1.1-rpigcb_15576.5

Sequence:


               
               CTTCGCTGCCCAGGTGCGCTGAGGAACCAGGCAAACATCAGCTCTCGGGAGAAGGCGAGG
AAGGGTCAACTGCTGATGCTAATCAGAAGAAGGAATTTGGTTCAGGTTTTGAGTTGGAAA
CACCCGGGCTTGAATCTAGACCTTGATGGTTACTTGTTTCATGAGCTGGGGCAGGTAGCT
TTACCTCTCCCCTGAGCCTCAGTTTCCTCATCTGTGAAACAGAAGGAAAAAAAAGTGTCA
GCTCTTCAGTTATAAACTGCTGCCTGTGCCTTTCATTGTCTGAAGAATGGTTTCAGACCA
GGGCATCATCAGAGCTCGGCTCTCCTGAGGATTTTTGCTTCCCTGGAGATAGAATTCTTC
TCAAAAGAGGTAGGGGCTGATAAGGGAAAGTGCTTTTCATTAGACCCTCACATTTTCCAG
AGCATTATATTTATAGAAAAGCCTTTTAGGTAGTGTCCTATTAGCTTGCAGACTTTCCCA
TCCTTCCTTTCTCCTGTGGCTTTGAAAGAGGCAGGAGGAAGGTTTTGTAACGGAGTACCT
GATGATATGGACTCCTTGGGCAGACCAGTTCATCTGGCCTCAGTTTCTTGATCTTGGAAA
TGGGAAAACTTCTTTCTTTCNTAC------------------------CTGTTNCCGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCGCTGCCCAGGTGCGCTGAGGAACCAGGCAAACATCAGCTCTCGGGAGAAGGCGAGG
AAGGGTCAACTGCTGATGCTAATCAGAAGAAGGAATTTGGTTCAGGTTTTGAGTTGGAAA
CACCCGGGCTTGAATCTAGACCTTGATGGTTACTTGTTTCATGAGCTGGGGCAGGTAGCT
TTACCTCTCCCCTGAGCCTCAGTTTCCTCATCTGTGAAACAGAAGGAAAAAAAAGTGTCA
GCTCTTCAGTTATAAACTGCTGCCTGTGCCTTTCATTGTCTGAAGAATGGTTTCAGACCA
GGGCATCATCAGAGCTCGGCTCTCCTGAGGATTTTTGCTTCCCTGGAGATAGAATTCTTC
TCAAAAGAGGTAGGGGCTGATAAGGGAAAGTGCTTTTCATTAGACCCTCACATTTTCCAG
AGCATTATATTTATAGAAAAGCCTTTTAGGTAGTGTCCTATTAGCTTGCAGACTTTCCCA
TCCTTCCTTTCTCCTGTGGCTTTGAAAGAGGCAGGAGGAAGGTTTTGTAACGGAGTACCT
GATGATATGGACTCCTTGGGCAGACCAGTTCATCTGGCCTCAGTTTCTTGATCTTGGAAA
TGGGAAAACTTCTTTCTTTCNTAC------------------------CTGTTNCCGCAG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               3-219, gnl|bosTau2|chr17 (32207398-32207607)
               

               
               3-219, gnl|Hg17|chr12 (116966691-116966471)
               


               
               222-537, gnl|bosTau2|chr17 (32207711-32208017)
               

               
               222-537, gnl|Hg17|chr12 (116966159-116965787)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-219, gnl|bosTau2|chr17 (32207398-32207607)
               

               
               3-219, gnl|Hg17|chr12 (116966691-116966471)
               


               
               222-537, gnl|bosTau2|chr17 (32207711-32208017)
               

               
               222-537, gnl|Hg17|chr12 (116966159-116965787)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	3-219, gnl\|bosTau2\|chr17 (32207398-32207607)
	3-219, gnl\|Hg17\|chr12 (116966691-116966471)

	222-537, gnl\|bosTau2\|chr17 (32207711-32208017)
	222-537, gnl\|Hg17\|chr12 (116966159-116965787)