Non-Coding RNA Search

Ss1.1-rpigcb_15792.5

Sequence:


               
               GCCGGGCGGGGTGAGCAGCCGAGCAGGAGGAAGAGCCTCTGAGGTGGCTCCGGGCAGCAT
TGGCGACATGGCCGACACCCCCAGAGATGCGGGGCTCAAGCAGGCGCCTGCGCCGCGGAA
CGAGAAGGCCCCCGTGGACTTCGGCTACGTGGGGATCGACTCCATCCTGGAGCAGATGCG
CAGGAAGGCGATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGGCAGAGCGGCCT
GGGCAAGTCCACCTTGATCAACACCCTCTTCAAGTCCAAGATCAGCCGGAAGTCAGTGCA
GCCCCCCTCCGAGGAGCGCATCCCTAAGACCATTGAGATCAAGTCCATCACACACGATAT
CGAGGAGAAGGGCGTCCGCATGAAGCTGACGGTCATCGACACGCCGGGCTTCGGGGACCA
CATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATTAACGACCAGTACGAGAA
GTACCTGCAGGAGGAGGTCAACATCAACCGGAAGAAGCGCATCCCCGACACGCGCGTCCA
CTGCTGCCTCTACTTCATCCCCGCCACGGGCCACGCCCTCAGGCCCCTGGACATCGAGTT
CATGAAGCGCCTGAGCAAAGTGGTCAACATCGTCCCGGTCATTGCCAAGGCCGACACGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGGGCGGGGTGAGCAGCCGAGCAGGAGGAAGAGCCTCTGAGGTGGCTCCGGGCAGCAT
TGGCGACATGGCCGACACCCCCAGAGATGCGGGGCTCAAGCAGGCGCCTGCGCCGCGGAA
CGAGAAGGCCCCCGTGGACTTCGGCTACGTGGGGATCGACTCCATCCTGGAGCAGATGCG
CAGGAAGGCGATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGGCAGAGCGGCCT
GGGCAAGTCCACCTTGATCAACACCCTCTTCAAGTCCAAGATCAGCCGGAAGTCAGTGCA
GCCCCCCTCCGAGGAGCGCATCCCTAAGACCATTGAGATCAAGTCCATCACACACGATAT
CGAGGAGAAGGGCGTCCGCATGAAGCTGACGGTCATCGACACGCCGGGCTTCGGGGACCA
CATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATTAACGACCAGTACGAGAA
GTACCTGCAGGAGGAGGTCAACATCAACCGGAAGAAGCGCATCCCCGACACGCGCGTCCA
CTGCTGCCTCTACTTCATCCCCGCCACGGGCCACGCCCTCAGGCCCCTGGACATCGAGTT
CATGAAGCGCCTGAGCAAAGTGGTCAACATCGTCCCGGTCATTGCCAAGGCCGACACGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10433911|dbj|BAB14057.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10433911|dbj|BAB14057.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               197-642, gnl|bosTau2|chr16 (36125150-36125582)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               197-642, gnl|bosTau2|chr16 (36125150-36125582)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               cty (0.10408)