Ss1.1-rpigcb_15801.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTGTCACGTCCACCGAGTAATGCTGGTCCAAGAGCTCTGGGCAGGACACGCTCACAGG CGGCTCCGTGGGGTTGGAGAAGCAGCCCTGGTTCCTCCCCCACATCTGGCTGGTCAGCTC GGGGTAGCAGAGGTCGGCACACAGGGCCACGGGTGTGGCCATGTCCACCACGTACACGGG AGGCCAGTGGCGGGAGGAGACGAGCAGGTCCACGTGGTCGAGGGCGCTCTCGCCCCGCAC GAGGCACTTGGAGCCGCAGACCACCTGATGGGGGCACACCTTGTAGATCTTACCCCCTGT GAGGTGAGGCGGGGGCTGTCGAGGTCTGGCTCCATTCTGAACAGATTCGTAGAGAGCCAA CAGGGAAAGGCAGAGCTGGTCCTTGGAGTCCTCGGCGGCGAAGGGGATCCCACACTGCCT CAGCAGGCGCCACAGCTCCTCCTCGCTGTAGGAGCTCAGCTCCTCGAGCTTGCAGGCGCC CTCCTGGAGCAGCCGCACCAAGGCGCTGCCATTGCCGGGTGCCGGGGGCACGTCCAGGTT CTTGTCTTTCTCGGTGTTGACGACCACAGCCCCTCTCATGAGCGGCGGGAAGAAGGGCGC GACGACGGAGGCATCGAACTTGGTGATGGGGATGCTGGCGGGGAAGGCCACCTGCTCGAT CACTTCCGTCTCCATCGTGGCCCAGAAGTCCTCCACGTTCACCTCGCTGGAGGCCAGGAA CTCGGGCCAGGTGAACTCCACACTCTCCAGGGCCAGCACGTTCTCTTCGCTCCTCTGGGC CACCTCCACCGTGGGGGCCACGCCGCAGATGCCACAGATCATGTCGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTGTCACGTCCACCGAGTAATGCTGGTCCAAGAGCTCTGGGCAGGACACGCTCACAGG CGGCTCCGTGGGGTTGGAGAAGCAGCCCTGGTTCCTCCCCCACATCTGGCTGGTCAGCTC GGGGTAGCAGAGGTCGGCACACAGGGCCACGGGTGTGGCCATGTCCACCACGTACACGGG AGGCCAGTGGCGGGAGGAGACGAGCAGGTCCACGTGGTCGAGGGCGCTCTCGCCCCGCAC GAGGCACTTGGAGCCGCAGACCACCTGATGGGGGCACACCTTGTAGATCTTACCCCCTGT GAGGTGAGGCGGGGGCTGTCGAGGTCTGGCTCCATTCTGAACAGATTCGTAGAGAGCCAA CAGGGAAAGGCAGAGCTGGTCCTTGGAGTCCTCGGCGGCGAAGGGGATCCCACACTGCCT CAGCAGGCGCCACAGCTCCTCCTCGCTGTAGGAGCTCAGCTCCTCGAGCTTGCAGGCGCC CTCCTGGAGCAGCCGCACCAAGGCGCTGCCATTGCCGGGTGCCGGGGGCACGTCCAGGTT CTTGTCTTTCTCGGTGTTGACGACCACAGCCCCTCTCATGAGCGGCGGGAAGAAGGGCGC GACGACGGAGGCATCGAACTTGGTGATGGGGATGCTGGCGGGGAAGGCCACCTGCTCGAT CACTTCCGTCTCCATCGTGGCCCAGAAGTCCTCCACGTTCACCTCGCTGGAGGCCAGGAA CTCGGGCCAGGTGAACTCCACACTCTCCAGGGCCAGCACGTTCTCTTCGCTCCTCTGGGC CACCTCCACCGTGGGGGCCACGCCGCAGATGCCACAGATCATGTCGTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 55-271, gnl|bosTau2|chr7 (41891918-41891702) | |
| 55-271, gnl|Hg17|chr5 (149410217-149410003) | |
| 55-271, gnl|Mm7|chr18 (61523291-61523507) | |
| 495-737, gnl|bosTau2|chr7 (41887843-41887602) | |
| 495-737, gnl|canFam2|chr4 (62220773-62220538) | |
| 495-737, gnl|danRer3|chr17 (18506474-18506271) | |
| 495-737, gnl|dasNov1|scaffold_116724 (574-809) | |
| 495-737, gnl|echTel1|scaffold_311071 (52440-52675) | |
| 495-737, gnl|fr1|chrUn (221169348-221169553) | |
| 495-737, gnl|galGal2|chr13 (12237888-12237658) | |
| 495-737, gnl|hg17|chr5 (149405219-149405454) | |
| 495-737, gnl|Hg17|chr5 (149405462-149405220) | |
| 495-737, gnl|loxAfr1|scaffold_920 (83596-83831) | |
| 495-737, gnl|mm7|chr18 (61527069-61526831) | |
| 495-737, gnl|Mm7|chr18 (61526821-61527063) | |
| 495-737, gnl|monDom2|scaffold_6 (57550797-57550562) | |
| 495-737, gnl|oryCun1|scaffold_204338 (12745-12510) | |
| 495-737, gnl|panTro1|chr4 (156313343-156313578) | |
| 495-737, gnl|rheMac2|chr6 (146523773-146524008) | |
| 495-737, gnl|rn3|chr18 (57184818-57184580) | |
| 495-737, gnl|tetNig1|chr1 (483195-482992) | |
| 495-737, gnl|xenTro1|scaffold_261 (71269-71041) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-271, gnl|bosTau2|chr7 (41891918-41891702) | |
| 55-271, gnl|Hg17|chr5 (149410217-149410003) | |
| 55-271, gnl|Mm7|chr18 (61523291-61523507) | |
| 495-737, gnl|bosTau2|chr7 (41887843-41887602) | |
| 495-737, gnl|canFam2|chr4 (62220773-62220538) | |
| 495-737, gnl|danRer3|chr17 (18506474-18506271) | |
| 495-737, gnl|dasNov1|scaffold_116724 (574-809) | |
| 495-737, gnl|echTel1|scaffold_311071 (52440-52675) | |
| 495-737, gnl|fr1|chrUn (221169348-221169553) | |
| 495-737, gnl|galGal2|chr13 (12237888-12237658) | |
| 495-737, gnl|hg17|chr5 (149405219-149405454) | |
| 495-737, gnl|Hg17|chr5 (149405462-149405220) | |
| 495-737, gnl|loxAfr1|scaffold_920 (83596-83831) | |
| 495-737, gnl|mm7|chr18 (61527069-61526831) | |
| 495-737, gnl|Mm7|chr18 (61526821-61527063) | |
| 495-737, gnl|monDom2|scaffold_6 (57550797-57550562) | |
| 495-737, gnl|oryCun1|scaffold_204338 (12745-12510) | |
| 495-737, gnl|panTro1|chr4 (156313343-156313578) | |
| 495-737, gnl|rheMac2|chr6 (146523773-146524008) | |
| 495-737, gnl|rn3|chr18 (57184818-57184580) | |
| 495-737, gnl|tetNig1|chr1 (483195-482992) | |
| 495-737, gnl|xenTro1|scaffold_261 (71269-71041) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |