Non-Coding RNA Search

Ss1.1-rpigcb_16240.5

Sequence:


               
               AGAGAAAAAACAATTTGACCTTATTTGGATGCATGATCTGGGTGAACAGCTAAACAGAGC
ATGCCCTGTTAGTAGCAGCCTACTCATTCTTCCGTCCCTGATGTGATGAATCATTGCCAC
ATGCTAGATGGGCCCTTTCTGTCCAGGTTTTCTCCCTCAGGGCTGAGCACTGTATCAAAA
TAAGAGTTCCTGTGGAGTCATGGAATAGATCAGCTGTAAAATGGGGGAGATGTGGGCTGA
TTCGGGATGTATACAAAATATCACTATCATTTTCCTCATTCCAGAGGAACACAGGCTGTC
TTCATCCTTTTTAGTTATACGCTCACATATTCAATTATCAAATGATATTTAACTGAAGTC
ATTTAATAACTCTTTAAATACCTGTTCTAGAAAGAACACATTTTGAAAGTTCTACAAAAT
CCTCTTCCAGATGACTAGAAGCACTCTCTTTCTTTTACACAATACCAACATCACTGGCCT
GAAAATCTTTTCTGTGCTGGGTTGTAAATATAAATAAATTACTTGTTTTGTAAACTTTTG
TAAAGAATATTTTGGTAGAAATACTTAAAGCATATTCTTTGGGTTATATTTATACATATG
TGAAATAAATATACTATCAAAAGGTTATATTTTATACAAAAAGTAAATTGTTACCTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGAAAAAACAATTTGACCTTATTTGGATGCATGATCTGGGTGAACAGCTAAACAGAGC
ATGCCCTGTTAGTAGCAGCCTACTCATTCTTCCGTCCCTGATGTGATGAATCATTGCCAC
ATGCTAGATGGGCCCTTTCTGTCCAGGTTTTCTCCCTCAGGGCTGAGCACTGTATCAAAA
TAAGAGTTCCTGTGGAGTCATGGAATAGATCAGCTGTAAAATGGGGGAGATGTGGGCTGA
TTCGGGATGTATACAAAATATCACTATCATTTTCCTCATTCCAGAGGAACACAGGCTGTC
TTCATCCTTTTTAGTTATACGCTCACATATTCAATTATCAAATGATATTTAACTGAAGTC
ATTTAATAACTCTTTAAATACCTGTTCTAGAAAGAACACATTTTGAAAGTTCTACAAAAT
CCTCTTCCAGATGACTAGAAGCACTCTCTTTCTTTTACACAATACCAACATCACTGGCCT
GAAAATCTTTTCTGTGCTGGGTTGTAAATATAAATAAATTACTTGTTTTGTAAACTTTTG
TAAAGAATATTTTGGTAGAAATACTTAAAGCATATTCTTTGGGTTATATTTATACATATG
TGAAATAAATATACTATCAAAAGGTTATATTTTATACAAAAAGTAAATTGTTACCTTTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-660, gnl|bosTau2|chr15 (4557226-4557885)
               

               
               5-660, gnl|Hg17|chr11 (95350660-95349982)
               

               
               5-660, gnl|Mm7|chr9 (13544327-13545000)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-660, gnl|bosTau2|chr15 (4557226-4557885)
               

               
               5-660, gnl|Hg17|chr11 (95350660-95349982)
               

               
               5-660, gnl|Mm7|chr9 (13544327-13545000)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	5-660, gnl\|bosTau2\|chr15 (4557226-4557885)
	5-660, gnl\|Hg17\|chr11 (95350660-95349982)
	5-660, gnl\|Mm7\|chr9 (13544327-13545000)