Non-Coding RNA Search

Ss1.1-rpigcb_16658.5

Sequence:


               
               GAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTCAATGTAGACATTTTAAA
TATGAGATTTATTTAAATTTAAAGAAACACTGAAAATAAACACTTTTAACAAATTATATC
AAAACACTTAAAACATAATCTAGGAATGTTAAACATAAATTCTCAATTCCAAAAAAATGA
CATTCATAGAATACATCCCGGAGTTGGCCAATTTGGAGTTTACTCAATTCTAGCATTTTT
ATATAAGCTTCACCATCAACCCTTCCTAAAAGTCTGTGATTGCAATTCAACTTTATAAGG
TGAATCAAGTCTTCTTTGCAATATCCTCACCTAACTTTTTCAAACACCAACACTTATACC
TGCCAGGAAATTATAAAATCGTATGAAACTTACACTGAAGGGCTTGATGAAAAGGCTGTG
TCTATATAGTCTGCTTCTCACCTCAGCAAGCACGCACACGCACACACGCAAAATTCTCAG
ATATAGATGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTCAATGTAGACATTTTAAA
TATGAGATTTATTTAAATTTAAAGAAACACTGAAAATAAACACTTTTAACAAATTATATC
AAAACACTTAAAACATAATCTAGGAATGTTAAACATAAATTCTCAATTCCAAAAAAATGA
CATTCATAGAATACATCCCGGAGTTGGCCAATTTGGAGTTTACTCAATTCTAGCATTTTT
ATATAAGCTTCACCATCAACCCTTCCTAAAAGTCTGTGATTGCAATTCAACTTTATAAGG
TGAATCAAGTCTTCTTTGCAATATCCTCACCTAACTTTTTCAAACACCAACACTTATACC
TGCCAGGAAATTATAAAATCGTATGAAACTTACACTGAAGGGCTTGATGAAAAGGCTGTG
TCTATATAGTCTGCTTCTCACCTCAGCAAGCACGCACACGCACACACGCAAAATTCTCAG
ATATAGATGCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               51-492, gnl|bosTau2|chr13 (61669109-61668672)
               

               
               51-492, gnl|Hg17|chr10 (126075863-126076298)
               

               
               51-492, gnl|Mm7|chr7 (128962527-128962899)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-492, gnl|bosTau2|chr13 (61669109-61668672)
               

               
               51-492, gnl|Hg17|chr10 (126075863-126076298)
               

               
               51-492, gnl|Mm7|chr7 (128962527-128962899)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cty (0.31224)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.31224)
               

               
               csk (0.140746)

	51-492, gnl\|bosTau2\|chr13 (61669109-61668672)
	51-492, gnl\|Hg17\|chr10 (126075863-126076298)
	51-492, gnl\|Mm7\|chr7 (128962527-128962899)