Ss1.1-rpigcb_16674.5
|
AAACTACTGAGGAAAACTGCCTGGTACAATTAGAATCACCCCCATACCGTACAGGTGCCC
GATGACAAGGAGGACATCAGAGGGATGGCTTTTTGGGCTTCATTGAGCGAGGTGAAGACA
CATTTAGGACGAGCTTCTCAGGTCTGGCCCTTCTTGGGCCCCGGCTGAGAAACTGGAAGT
ACTAACTACCTTCTAGCATCTTCAAGAAAGTGGATTGTTTACTCCTCTTGCAGACCCTGA
ATGATCAGGAACTTAGCTCTGTGATTCATGCGTTTCCTCCTGCCGATATTATCGGAGCAT
CCACTTGGAAAGCAAAGGCAGAATTTCGCCCAGCTGTGTATTTTGATCTTCTTCCGGATG
CAGGTGCCTTAATGAAGCTCTCGAAATATTTTAGGAGCTGCTCAGGGAGTGTTAGGCAGA
ACTGTTTGGACTACATTGTTTTCTCTTAGATTATGTGATCTTTGTAGGGCACTGGCAAAG
ACGTGTGCGTGCGTGCGTGTGCGTGTGTGTGGGTGTGTGTGTGTGGTGCGTGTGTTTGCA
GACATGCAGACCTGCAGCTGAGCTAATCCCGGGGTTTTCTTGTGAAGTCTTTCCACATTT
CAGTCATGGCTGAGAGTAGACCCAAAGCCAAGCATCGGTCATTGCTTGCTGTTTGCCATC
AGGCATAAAATCACTTTCTCAACTCATCAACCTTTCCTTTTAAATTTATGCTGAGAACTC
CCCGTGTCTGAATGTATCTAACTCCTGCAGTAATCCCATAGCAGATAAGATGTAAGCAAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAACTACTGAGGAAAACTGCCTGGTACAATTAGAATCACCCCCATACCGTACAGGTGCCC
GATGACAAGGAGGACATCAGAGGGATGGCTTTTTGGGCTTCATTGAGCGAGGTGAAGACA
CATTTAGGACGAGCTTCTCAGGTCTGGCCCTTCTTGGGCCCCGGCTGAGAAACTGGAAGT
ACTAACTACCTTCTAGCATCTTCAAGAAAGTGGATTGTTTACTCCTCTTGCAGACCCTGA
ATGATCAGGAACTTAGCTCTGTGATTCATGCGTTTCCTCCTGCCGATATTATCGGAGCAT
CCACTTGGAAAGCAAAGGCAGAATTTCGCCCAGCTGTGTATTTTGATCTTCTTCCGGATG
CAGGTGCCTTAATGAAGCTCTCGAAATATTTTAGGAGCTGCTCAGGGAGTGTTAGGCAGA
ACTGTTTGGACTACATTGTTTTCTCTTAGATTATGTGATCTTTGTAGGGCACTGGCAAAG
ACGTGTGCGTGCGTGCGTGTGCGTGTGTGTGGGTGTGTGTGTGTGGTGCGTGTGTTTGCA
GACATGCAGACCTGCAGCTGAGCTAATCCCGGGGTTTTCTTGTGAAGTCTTTCCACATTT
CAGTCATGGCTGAGAGTAGACCCAAAGCCAAGCATCGGTCATTGCTTGCTGTTTGCCATC
AGGCATAAAATCACTTTCTCAACTCATCAACCTTTCCTTTTAAATTTATGCTGAGAACTC
CCCGTGTCTGAATGTATCTAACTCCTGCAGTAATCCCATAGCAGATAAGATGTAAGCAAG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
382-498, + strand, RNAmicro p=0.937094 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
382-498, + strand, RNAmicro p=0.937094 |
Human gene identifier and UTR site,
human gene reading direction
|
3-754, gnl|bosTau2|chr29 (23681402-23682133) |
|
3-754, gnl|canFam2|chr5 (9190195-9189495) |
|
3-754, gnl|dasNov1|scaffold_88996 (838-111) |
|
3-754, gnl|echTel1|scaffold_310627 (126890-126149) |
|
3-754, gnl|hg17|chr11 (127834840-127835622) |
|
3-754, gnl|Hg17|chr11 (127835740-127834965) |
|
3-754, gnl|loxAfr1|scaffold_4938 (89769-89064) |
|
3-754, gnl|mm7|chr9 (32658479-32657777) |
|
3-754, gnl|Mm7|chr9 (32657678-32658363) |
|
3-754, gnl|monDom2|scaffold_15 (16530054-16530876) |
|
3-754, gnl|oryCun1|scaffold_204138 (23488-24208) |
|
3-754, gnl|panTro1|chr9 (129963269-129964031) |
|
3-754, gnl|rheMac2|chr14 (126590833-126591611) |
|
3-754, gnl|rn3|chr8 (32553025-32552309) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-754, gnl|bosTau2|chr29 (23681402-23682133) |
|
3-754, gnl|canFam2|chr5 (9190195-9189495) |
|
3-754, gnl|dasNov1|scaffold_88996 (838-111) |
|
3-754, gnl|echTel1|scaffold_310627 (126890-126149) |
|
3-754, gnl|hg17|chr11 (127834840-127835622) |
|
3-754, gnl|Hg17|chr11 (127835740-127834965) |
|
3-754, gnl|loxAfr1|scaffold_4938 (89769-89064) |
|
3-754, gnl|mm7|chr9 (32658479-32657777) |
|
3-754, gnl|Mm7|chr9 (32657678-32658363) |
|
3-754, gnl|monDom2|scaffold_15 (16530054-16530876) |
|
3-754, gnl|oryCun1|scaffold_204138 (23488-24208) |
|
3-754, gnl|panTro1|chr9 (129963269-129964031) |
|
3-754, gnl|rheMac2|chr14 (126590833-126591611) |
|
3-754, gnl|rn3|chr8 (32553025-32552309) |
|
cty (0.20816) |
|
med (0.116252) |
|
cty (0.20816) |
|
med (0.116252) |
