Non-Coding RNA Search

Ss1.1-rpigcb_16819.5

Sequence:


               
               GTAAAAAGATAGTAATCTCTTCCCCAAATTGTTTCTGTGTTAAATTATGCAACTAGAATT
TGTGGAAGAAGAAAATAACCTGCCATGCTTGTATTATTCTTAGAGACTGTGCTTTTAGAA
CGTTAAAGTGGAATCCAGATAATGAAAGTGTTAGAACAACTGTCATGTGTCAAGAGAGCA
AAGGCACCTGACCCCACACTCTGGGAGGTGCTCTGCAAGTGACCTTCTGGTTGCTGCCCC
CAAAAGAACAAAAAATTGCTTCCAGAGTCTTTAAACTCTCATGTTATTACCACTAAGGTT
TAAGGTCTGGACAGGGTGTGCTCTGACCATTTTTAAAGCTTTTGGATTATTTTAATACAG
TTTTAAGATGTTGGCTCCTAAAATTCTCAAATCATGGTCTAGGTAGATTAAAAAGGATGC
CTGAACCAATCCTTCTTCCACAGACCATTAAAACGTAGACTTGGAGGCAAACCGTTGAAA
CCCAGAGCAGTGAATTTTTTAACTGAACCTGGTGATATACCACCCCCTCCAAGATTTCCC
CAAGTTAAGAATTCCCCGCTTTGATCTATCTGATAGTGCTTTTCCTGACCAGTCACTGAA
GGACCATGATCCAAAGTTACTCAGAAACTGGGATGTATACCCATATGCGATGCAGAACTT
TGAACCTAGTAGGCACTCAATAAATGTTCGAGCCAGTCGTTCAATCCTAATGTTTCAGGA
AAACTTAAACTGTATCACGTTTTATTTTTTTAATGGCTTCACCAAAACTGAAGTAGACCA
AAGCAGCCCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAAAAGATAGTAATCTCTTCCCCAAATTGTTTCTGTGTTAAATTATGCAACTAGAATT
TGTGGAAGAAGAAAATAACCTGCCATGCTTGTATTATTCTTAGAGACTGTGCTTTTAGAA
CGTTAAAGTGGAATCCAGATAATGAAAGTGTTAGAACAACTGTCATGTGTCAAGAGAGCA
AAGGCACCTGACCCCACACTCTGGGAGGTGCTCTGCAAGTGACCTTCTGGTTGCTGCCCC
CAAAAGAACAAAAAATTGCTTCCAGAGTCTTTAAACTCTCATGTTATTACCACTAAGGTT
TAAGGTCTGGACAGGGTGTGCTCTGACCATTTTTAAAGCTTTTGGATTATTTTAATACAG
TTTTAAGATGTTGGCTCCTAAAATTCTCAAATCATGGTCTAGGTAGATTAAAAAGGATGC
CTGAACCAATCCTTCTTCCACAGACCATTAAAACGTAGACTTGGAGGCAAACCGTTGAAA
CCCAGAGCAGTGAATTTTTTAACTGAACCTGGTGATATACCACCCCCTCCAAGATTTCCC
CAAGTTAAGAATTCCCCGCTTTGATCTATCTGATAGTGCTTTTCCTGACCAGTCACTGAA
GGACCATGATCCAAAGTTACTCAGAAACTGGGATGTATACCCATATGCGATGCAGAACTT
TGAACCTAGTAGGCACTCAATAAATGTTCGAGCCAGTCGTTCAATCCTAATGTTTCAGGA
AAACTTAAACTGTATCACGTTTTATTTTTTTAATGGCTTCACCAAAACTGAAGTAGACCA
AAGCAGCCCCTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-788, gnl|bosTau2|chr5 (51286725-51287489)
               

               
               1-788, gnl|Hg17|chr12 (26382503-26381704)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-788, gnl|bosTau2|chr5 (51286725-51287489)
               

               
               1-788, gnl|Hg17|chr12 (26382503-26381704)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

	1-788, gnl\|bosTau2\|chr5 (51286725-51287489)
	1-788, gnl\|Hg17\|chr12 (26382503-26381704)