Ss1.1-rpigcb_18160.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGATCTTCACCTACACAGACCCGGGAGCTGTCCGAAGAGCAAAGCACCGATGTCCATA TGGTTAGTGATAGTGATGGAGACGACTTTGAAGATGCTTCTGAATTTGGGGTGGATGATG GGGAAGTATTCGGCATGGCATCATCTGCCCTAAGGAAATCTCCAATGATGCCAGAAAACG CAGAAAATGAAGGAGATGCCTTATTACAATTTACAGCAGAGTTTTCTTCAAGATACGGTG ACTGCCACCCTGTATTTTTTATTGGCTCATTGGAAGCTGCTTTTCAAGAGGCCTTCTATG TGAAAGCCCGAGATAGAAAGCTTCTTGCTATCTACCTCCACCATGATGAAAGTGTATTAA CCAACGTGTTCTGCTCACAAATGCTTTGTGCTGAATCTATTGTCTCTTATCTGAGTCAAA ATTTTATAACCTGGGCTTGGGATCTGACAAAGGACGCCAACAGAGCAAGATTTCTGACAA TGTGCAATAGACACTTTGGCAGTGTTGTTGCTCAAACCATTCGGACTCAAAAAACAGATC AGTTTCCACTTTTTCTGATTATTATGGGAAAACGATCATCTAATGAAGTGTTAAATGTGA TACAAGGTAACACAACAGTGGATGAGTTAATGATGAGACTCATGGCTGCAATGGAGATCT TCACAGCCCAACAACAAGAAGATATAAAGGATGAGGATGAACGAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGATCTTCACCTACACAGACCCGGGAGCTGTCCGAAGAGCAAAGCACCGATGTCCATA TGGTTAGTGATAGTGATGGAGACGACTTTGAAGATGCTTCTGAATTTGGGGTGGATGATG GGGAAGTATTCGGCATGGCATCATCTGCCCTAAGGAAATCTCCAATGATGCCAGAAAACG CAGAAAATGAAGGAGATGCCTTATTACAATTTACAGCAGAGTTTTCTTCAAGATACGGTG ACTGCCACCCTGTATTTTTTATTGGCTCATTGGAAGCTGCTTTTCAAGAGGCCTTCTATG TGAAAGCCCGAGATAGAAAGCTTCTTGCTATCTACCTCCACCATGATGAAAGTGTATTAA CCAACGTGTTCTGCTCACAAATGCTTTGTGCTGAATCTATTGTCTCTTATCTGAGTCAAA ATTTTATAACCTGGGCTTGGGATCTGACAAAGGACGCCAACAGAGCAAGATTTCTGACAA TGTGCAATAGACACTTTGGCAGTGTTGTTGCTCAAACCATTCGGACTCAAAAAACAGATC AGTTTCCACTTTTTCTGATTATTATGGGAAAACGATCATCTAATGAAGTGTTAAATGTGA TACAAGGTAACACAACAGTGGATGAGTTAATGATGAGACTCATGGCTGCAATGGAGATCT TCACAGCCCAACAACAAGAAGATATAAAGGATGAGGATGAACGAGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 37-168, gnl|bosTau2|chr3 (66106027-66105896) | |
| 37-168, gnl|canFam2|chr15 (13561180-13561046) | |
| 37-168, gnl|danRer3|chr8 (9304180-9304046) | |
| 37-168, gnl|echTel1|scaffold_310406 (89762-89628) | |
| 37-168, gnl|fr1|chrUn (232104493-232104624) | |
| 37-168, gnl|galGal2|chr8 (24097637-24097771) | |
| 37-168, gnl|hg17|chr1 (50762366-50762500) | |
| 37-168, gnl|Hg17|chr1 (50762509-50762378) | |
| 37-168, gnl|loxAfr1|scaffold_119015 (4139-4273) | |
| 37-168, gnl|mm7|chr4 (109216895-109216761) | |
| 37-168, gnl|Mm7|chr4 (109216752-109216881) | |
| 37-168, gnl|monDom2|scaffold_70 (2895173-2895039) | |
| 37-168, gnl|oryCun1|scaffold_168775 (17333-17199) | |
| 37-168, gnl|panTro1|chr1 (48967613-48967747) | |
| 37-168, gnl|rheMac2|chr1 (53409310-53409444) | |
| 37-168, gnl|rn3|chr5 (131262287-131262153) | |
| 37-168, gnl|tetNig1|chr1 (10972317-10972441) | |
| 37-168, gnl|xenTro1|scaffold_816 (425649-425512) | |
| 202-314, gnl|bosTau2|chr3 (66103783-66103669) | |
| 202-314, gnl|canFam2|chr15 (13563285-13563204) | |
| 202-314, gnl|danRer3|chr8 (9304604-9304523) | |
| 202-314, gnl|echTel1|scaffold_161312 (8382-8304) | |
| 202-314, gnl|fr1|chrUn (232104180-232104261) | |
| 202-314, gnl|galGal2|chr8 (24095642-24095723) | |
| 202-314, gnl|hg17|chr1 (50760305-50760386) | |
| 202-314, gnl|Hg17|chr1 (50760425-50760311) | |
| 202-314, gnl|loxAfr1|scaffold_43786 (37686-37767) | |
| 202-314, gnl|mm7|chr4 (109218816-109218735) | |
| 202-314, gnl|Mm7|chr4 (109218694-109218808) | |
| 202-314, gnl|monDom2|scaffold_70 (2898248-2898167) | |
| 202-314, gnl|oryCun1|scaffold_168775 (19288-19207) | |
| 202-314, gnl|panTro1|chr1 (48965551-48965632) | |
| 202-314, gnl|rheMac2|chr1 (53407239-53407320) | |
| 202-314, gnl|tetNig1|chr1 (10971981-10972062) | |
| 202-314, gnl|xenTro1|scaffold_816 (427237-427148) | |
| 315-469, gnl|bosTau2|chr3 (66088919-66088765) | |
| 315-469, gnl|Hg17|chr1 (50744924-50744770) | |
| 315-469, gnl|Mm7|chr4 (109238248-109238402) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 37-168, gnl|bosTau2|chr3 (66106027-66105896) | |
| 37-168, gnl|canFam2|chr15 (13561180-13561046) | |
| 37-168, gnl|danRer3|chr8 (9304180-9304046) | |
| 37-168, gnl|echTel1|scaffold_310406 (89762-89628) | |
| 37-168, gnl|fr1|chrUn (232104493-232104624) | |
| 37-168, gnl|galGal2|chr8 (24097637-24097771) | |
| 37-168, gnl|hg17|chr1 (50762366-50762500) | |
| 37-168, gnl|Hg17|chr1 (50762509-50762378) | |
| 37-168, gnl|loxAfr1|scaffold_119015 (4139-4273) | |
| 37-168, gnl|mm7|chr4 (109216895-109216761) | |
| 37-168, gnl|Mm7|chr4 (109216752-109216881) | |
| 37-168, gnl|monDom2|scaffold_70 (2895173-2895039) | |
| 37-168, gnl|oryCun1|scaffold_168775 (17333-17199) | |
| 37-168, gnl|panTro1|chr1 (48967613-48967747) | |
| 37-168, gnl|rheMac2|chr1 (53409310-53409444) | |
| 37-168, gnl|rn3|chr5 (131262287-131262153) | |
| 37-168, gnl|tetNig1|chr1 (10972317-10972441) | |
| 37-168, gnl|xenTro1|scaffold_816 (425649-425512) | |
| 202-314, gnl|bosTau2|chr3 (66103783-66103669) | |
| 202-314, gnl|canFam2|chr15 (13563285-13563204) | |
| 202-314, gnl|danRer3|chr8 (9304604-9304523) | |
| 202-314, gnl|echTel1|scaffold_161312 (8382-8304) | |
| 202-314, gnl|fr1|chrUn (232104180-232104261) | |
| 202-314, gnl|galGal2|chr8 (24095642-24095723) | |
| 202-314, gnl|hg17|chr1 (50760305-50760386) | |
| 202-314, gnl|Hg17|chr1 (50760425-50760311) | |
| 202-314, gnl|loxAfr1|scaffold_43786 (37686-37767) | |
| 202-314, gnl|mm7|chr4 (109218816-109218735) | |
| 202-314, gnl|Mm7|chr4 (109218694-109218808) | |
| 202-314, gnl|monDom2|scaffold_70 (2898248-2898167) | |
| 202-314, gnl|oryCun1|scaffold_168775 (19288-19207) | |
| 202-314, gnl|panTro1|chr1 (48965551-48965632) | |
| 202-314, gnl|rheMac2|chr1 (53407239-53407320) | |
| 202-314, gnl|tetNig1|chr1 (10971981-10972062) | |
| 202-314, gnl|xenTro1|scaffold_816 (427237-427148) | |
| 315-469, gnl|bosTau2|chr3 (66088919-66088765) | |
| 315-469, gnl|Hg17|chr1 (50744924-50744770) | |
| 315-469, gnl|Mm7|chr4 (109238248-109238402) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |