Ss1.1-rpigcb_18172.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTGATGCGCACGGACCGGCCCGCGACGCCCGGGCCCCACTGTCCCCGGCACCTGGACGC CGGCCCGGTGGCCGCGCCCCAGCCGCGCTCTCTCGCCACCGCGGCTTCTTCGGAGTCGCT TGGCGCCGGCGGGGCACCTCGTTCTCCATGGGGCTGAGCGACTGGCTGAGGACCGTGTGC TGCTGCTGTCCGTGCAGGTGCCTGGAGGAGCCCGCCGTGCCGGAGAAGGAGCCCCTGGTC AGTGATAGCAATCCGTATTCTTCGTTTGGAGCCACTCTGGCGAGGGATGATGAGAAGAAC CTGTGGAGCATGCCTCACGATGTGTCCCACACAGAGGCAGATGACGACAGGATCCTGTAC AACTTGATCGTCATTCGTAATCAACAGGCCAAAGATTCAGAGGAGTGGCAAAAACTCAAC TATGATATCTACTCCCTGCGACAGATTCGAAGGGAAGTGAGAAATAGATGGAAAGGTATT TTGGAAGATTTAGGTTTTCAAAAGGAAGCAGACTCTTTGTTGTCAGTGACAAAACTCAGC ACCATAAGTGATACTAAAAACACAAGGAAAGCTCGGGAGATGTTGTTGAGACTGGCTGAA GAGACCAGTATTTTCCCAACTGGTTGGGAGCTCTCGGAGAGATACCTCTTTGTTGTGGAC CGTCTCATTGCACTCGATGCTGCAGAAGAGTTCTTTAAAATTGCTAGTCGAACTTACCCC AAGAAGCCTGGGGTCCCGTGCCTGGCAGATGGCCAGAAACAACTGCACTACCTTCCATTT CCAAGTCCCTAAAGGAGAGGCTATGAGGCAGAGTTGGAATTCTCCCAATGGACCTCAACA GCCAACCAAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTGATGCGCACGGACCGGCCCGCGACGCCCGGGCCCCACTGTCCCCGGCACCTGGACGC CGGCCCGGTGGCCGCGCCCCAGCCGCGCTCTCTCGCCACCGCGGCTTCTTCGGAGTCGCT TGGCGCCGGCGGGGCACCTCGTTCTCCATGGGGCTGAGCGACTGGCTGAGGACCGTGTGC TGCTGCTGTCCGTGCAGGTGCCTGGAGGAGCCCGCCGTGCCGGAGAAGGAGCCCCTGGTC AGTGATAGCAATCCGTATTCTTCGTTTGGAGCCACTCTGGCGAGGGATGATGAGAAGAAC CTGTGGAGCATGCCTCACGATGTGTCCCACACAGAGGCAGATGACGACAGGATCCTGTAC AACTTGATCGTCATTCGTAATCAACAGGCCAAAGATTCAGAGGAGTGGCAAAAACTCAAC TATGATATCTACTCCCTGCGACAGATTCGAAGGGAAGTGAGAAATAGATGGAAAGGTATT TTGGAAGATTTAGGTTTTCAAAAGGAAGCAGACTCTTTGTTGTCAGTGACAAAACTCAGC ACCATAAGTGATACTAAAAACACAAGGAAAGCTCGGGAGATGTTGTTGAGACTGGCTGAA GAGACCAGTATTTTCCCAACTGGTTGGGAGCTCTCGGAGAGATACCTCTTTGTTGTGGAC CGTCTCATTGCACTCGATGCTGCAGAAGAGTTCTTTAAAATTGCTAGTCGAACTTACCCC AAGAAGCCTGGGGTCCCGTGCCTGGCAGATGGCCAGAAACAACTGCACTACCTTCCATTT CCAAGTCCCTAAAGGAGAGGCTATGAGGCAGAGTTGGAATTCTCCCAATGGACCTCAACA GCCAACCAAAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-242, gnl|bosTau2|chr1 (71190877-71191118) | |
| 1-242, gnl|dasNov1|scaffold_67912 (9135-8416) | |
| 1-242, gnl|echTel1|scaffold_317156 (817-123) | |
| 1-242, gnl|hg17|chr2 (216703083-216703793) | |
| 1-242, gnl|Hg17|chr2 (216703703-216703462) | |
| 1-242, gnl|loxAfr1|scaffold_94728 (1983-2733) | |
| 1-242, gnl|mm7|chr1 (72453588-72454116) | |
| 1-242, gnl|Mm7|chr1 (72454065-72453858) | |
| 1-242, gnl|oryCun1|scaffold_212962 (87413-88110) | |
| 1-242, gnl|panTro1|chr13 (106878216-106878924) | |
| 1-242, gnl|rheMac2|chr12 (79836937-79837647) | |
| 1-242, gnl|rn3|chr9 (71504596-71505131) | |
| 657-852, gnl|bosTau2|chr1 (71258316-71258511) | |
| 657-852, gnl|canFam2|chr37 (25959725-25960065) | |
| 657-852, gnl|dasNov1|scaffold_15265 (6451-6134) | |
| 657-852, gnl|hg17|chr12 (31298312-31298646) | |
| 657-852, gnl|Hg17|chr2 (216635227-216635032) | |
| 657-852, gnl|loxAfr1|scaffold_8940 (47014-47368) | |
| 657-852, gnl|mm7|chr1 (72402476-72402810) | |
| 657-852, gnl|Mm7|chr1 (72402861-72402671) | |
| 657-852, gnl|oryCun1|scaffold_212962 (8296-8614) | |
| 657-852, gnl|panTro1|chrUn_random (35793838-35793504) | |
| 657-852, gnl|rheMac2|chr11 (31325044-31325375) | |
| 657-852, gnl|rn3|chr9 (71450371-71450693) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-242, gnl|bosTau2|chr1 (71190877-71191118) | |
| 1-242, gnl|dasNov1|scaffold_67912 (9135-8416) | |
| 1-242, gnl|echTel1|scaffold_317156 (817-123) | |
| 1-242, gnl|hg17|chr2 (216703083-216703793) | |
| 1-242, gnl|Hg17|chr2 (216703703-216703462) | |
| 1-242, gnl|loxAfr1|scaffold_94728 (1983-2733) | |
| 1-242, gnl|mm7|chr1 (72453588-72454116) | |
| 1-242, gnl|Mm7|chr1 (72454065-72453858) | |
| 1-242, gnl|oryCun1|scaffold_212962 (87413-88110) | |
| 1-242, gnl|panTro1|chr13 (106878216-106878924) | |
| 1-242, gnl|rheMac2|chr12 (79836937-79837647) | |
| 1-242, gnl|rn3|chr9 (71504596-71505131) | |
| 657-852, gnl|bosTau2|chr1 (71258316-71258511) | |
| 657-852, gnl|canFam2|chr37 (25959725-25960065) | |
| 657-852, gnl|dasNov1|scaffold_15265 (6451-6134) | |
| 657-852, gnl|hg17|chr12 (31298312-31298646) | |
| 657-852, gnl|Hg17|chr2 (216635227-216635032) | |
| 657-852, gnl|loxAfr1|scaffold_8940 (47014-47368) | |
| 657-852, gnl|mm7|chr1 (72402476-72402810) | |
| 657-852, gnl|Mm7|chr1 (72402861-72402671) | |
| 657-852, gnl|oryCun1|scaffold_212962 (8296-8614) | |
| 657-852, gnl|panTro1|chrUn_random (35793838-35793504) | |
| 657-852, gnl|rheMac2|chr11 (31325044-31325375) | |
| 657-852, gnl|rn3|chr9 (71450371-71450693) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| tes (0.207814) | |
| lnt (0.142308) |