Ss1.1-rpigcb_2315.5
|
CTGTGCTGTTTGCGGCGGCGTCTGGGAAGAGGCGCTCAGCGCCCTGGACCGAGGAGACAG
TAAAGCAGTGTTTGTACCTCTACCTGGCTCTCCTGCCTCAGAACCACAAGCTCATCCACG
AGCTGGCAGCCGTATACACGGAGGCCATCGCCGACATCAAGAGGACTGTGCTAAGGGTCA
TCGAACAGCCGATCCGAGGAATGGGCATGAACTCGCCAGAGCTGCTCCTGCTGGTGGAAA
ACTGTCCCAAGGGGGCAGAGACGCTGGTCACACGATGTCTGCACAGCCTCACAGACAAAG
TCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCCG
ACGTCCGCTTCCTCATCCCTGTGCTTAATGGGCTGGAAAAGAAAGAAGTGATCCAGGCCC
TGCCAAAGCTCATCAAACTCAACCCCATAGTGGTGAAAGAGGTCTTCAACCGCCTGCTGG
CACGCAGCATGGTGAAGGGAACTCGGCCTTGTCCCCCCTGAACCCAGGAGAACTTCTCAT
CGCATTACACAACATCGACTCGGCGAAGTGTGACATGAAGTCCATCATCAAAGCCACCAA
CCTGTGCTTTGCGGAGCGGAACGTGTACACGTCGGAGGTGCTGGCCGTGGTGATGCAGCA
GCTGATGGACCAGAGTCCCCTGCCCATGCTGCTCAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGTGCTGTTTGCGGCGGCGTCTGGGAAGAGGCGCTCAGCGCCCTGGACCGAGGAGACAG
TAAAGCAGTGTTTGTACCTCTACCTGGCTCTCCTGCCTCAGAACCACAAGCTCATCCACG
AGCTGGCAGCCGTATACACGGAGGCCATCGCCGACATCAAGAGGACTGTGCTAAGGGTCA
TCGAACAGCCGATCCGAGGAATGGGCATGAACTCGCCAGAGCTGCTCCTGCTGGTGGAAA
ACTGTCCCAAGGGGGCAGAGACGCTGGTCACACGATGTCTGCACAGCCTCACAGACAAAG
TCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCCG
ACGTCCGCTTCCTCATCCCTGTGCTTAATGGGCTGGAAAAGAAAGAAGTGATCCAGGCCC
TGCCAAAGCTCATCAAACTCAACCCCATAGTGGTGAAAGAGGTCTTCAACCGCCTGCTGG
CACGCAGCATGGTGAAGGGAACTCGGCCTTGTCCCCCCTGAACCCAGGAGAACTTCTCAT
CGCATTACACAACATCGACTCGGCGAAGTGTGACATGAAGTCCATCATCAAAGCCACCAA
CCTGTGCTTTGCGGAGCGGAACGTGTACACGTCGGAGGTGCTGGCCGTGGTGATGCAGCA
GCTGATGGACCAGAGTCCCCTGCCCATGCTGCTCAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
28-191, gnl|bosTau2|chr18 (38143296-38143458) |
|
28-191, gnl|Hg17|chr19 (51020431-51020269) |
|
28-191, gnl|Mm7|chr7 (16729822-16729984) |
| |
|
585-696, gnl|bosTau2|chr18 (38150760-38150871) |
|
585-696, gnl|canFam2|chr1 (112684520-112684311) |
|
585-696, gnl|danRer3|chr5 (68461956-68461757) |
|
585-696, gnl|dasNov1|scaffold_17721 (25652-25443) |
|
585-696, gnl|fr1|chrUn (243142308-243142508) |
|
585-696, gnl|hg17|chr19 (51013056-51013265) |
|
585-696, gnl|Hg17|chr19 (51013253-51013142) |
|
585-696, gnl|loxAfr1|scaffold_134402 (4481-4691) |
|
585-696, gnl|mm7|chr7 (16734931-16734723) |
|
585-696, gnl|Mm7|chr7 (16734732-16734843) |
|
585-696, gnl|monDom2|scaffold_205 (640833-640617) |
|
585-696, gnl|panTro1|chr20 (48313888-48314097) |
|
585-696, gnl|rn3|chr1 (78483608-78483400) |
|
585-696, gnl|tetNig1|chr2 (18398256-18398448) |
|
585-696, gnl|xenTro1|scaffold_105 (575612-575820) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
28-191, gnl|bosTau2|chr18 (38143296-38143458) |
|
28-191, gnl|Hg17|chr19 (51020431-51020269) |
|
28-191, gnl|Mm7|chr7 (16729822-16729984) |
| |
|
585-696, gnl|bosTau2|chr18 (38150760-38150871) |
|
585-696, gnl|canFam2|chr1 (112684520-112684311) |
|
585-696, gnl|danRer3|chr5 (68461956-68461757) |
|
585-696, gnl|dasNov1|scaffold_17721 (25652-25443) |
|
585-696, gnl|fr1|chrUn (243142308-243142508) |
|
585-696, gnl|hg17|chr19 (51013056-51013265) |
|
585-696, gnl|Hg17|chr19 (51013253-51013142) |
|
585-696, gnl|loxAfr1|scaffold_134402 (4481-4691) |
|
585-696, gnl|mm7|chr7 (16734931-16734723) |
|
585-696, gnl|Mm7|chr7 (16734732-16734843) |
|
585-696, gnl|monDom2|scaffold_205 (640833-640617) |
|
585-696, gnl|panTro1|chr20 (48313888-48314097) |
|
585-696, gnl|rn3|chr1 (78483608-78483400) |
|
585-696, gnl|tetNig1|chr2 (18398256-18398448) |
|
585-696, gnl|xenTro1|scaffold_105 (575612-575820) |
|
cty (0.20816) |
|
ute (0.132784) |
|
cty (0.20816) |
|
ute (0.132784) |
