Non-Coding RNA Search

Ss1.1-rpigcb_3957.5

Sequence:


               
               TTTGGTTTCTGCTCTTTGTGTACTAAAGGCCTAATTGTAGTTGGGAGATTTCCTTAAGCA
CGTCCTCCCAGAGCAGCAACTCAGAGGGAAAGGTGGAGCCGTGCCTTGCTTAGGTCTGGG
TTCTGCGGACAGATGCTCGTCTGTCCTGTGCCCACAGCAGCAGGGACGGGAAACCCTGGC
ATTTCAGACAACTATGCCAGCTTGCATTTTCCCACATCCCTGAGGCTTCTTCTTTCTCCT
CGTCTGCCCCAACACAGGGCAAGAGCAGGGGTAGAGCTGAGGCCTGTTCCTGGGGTCGGC
GTAGGTGACATTTGTGTATCCACAGTCTTACCTTTTAGAGTCAGGTTTGGCTACTTTGCA
GCTCACCCAAAGAGATACCACCTAATCCCCCAACCTACTTTTATTTTTTTTTTTTAATGA
TTAAAAGTAACTTTTGTAGTTTTTAAAAAAATCTTTCCTCTTTCATACAAATAAGAAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGTTTCTGCTCTTTGTGTACTAAAGGCCTAATTGTAGTTGGGAGATTTCCTTAAGCA
CGTCCTCCCAGAGCAGCAACTCAGAGGGAAAGGTGGAGCCGTGCCTTGCTTAGGTCTGGG
TTCTGCGGACAGATGCTCGTCTGTCCTGTGCCCACAGCAGCAGGGACGGGAAACCCTGGC
ATTTCAGACAACTATGCCAGCTTGCATTTTCCCACATCCCTGAGGCTTCTTCTTTCTCCT
CGTCTGCCCCAACACAGGGCAAGAGCAGGGGTAGAGCTGAGGCCTGTTCCTGGGGTCGGC
GTAGGTGACATTTGTGTATCCACAGTCTTACCTTTTAGAGTCAGGTTTGGCTACTTTGCA
GCTCACCCAAAGAGATACCACCTAATCCCCCAACCTACTTTTATTTTTTTTTTTTAATGA
TTAAAAGTAACTTTTGTAGTTTTTAAAAAAATCTTTCCTCTTTCATACAAATAAGAAATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               15-479, gnl|bosTau2|chr4 (54421876-54422327)
               

               
               15-479, gnl|Hg17|chr7 (137021578-137021109)
               

               
               15-479, gnl|Mm7|chr6 (37262612-37262133)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-479, gnl|bosTau2|chr4 (54421876-54422327)
               

               
               15-479, gnl|Hg17|chr7 (137021578-137021109)
               

               
               15-479, gnl|Mm7|chr6 (37262612-37262133)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               vin (0.332557)
               

               
               hyp (0.142837)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               hyp (0.142837)
               

               
               cty (0.10408)

	15-479, gnl\|bosTau2\|chr4 (54421876-54422327)
	15-479, gnl\|Hg17\|chr7 (137021578-137021109)
	15-479, gnl\|Mm7\|chr6 (37262612-37262133)