Ss1.1-rpigcb_4104.5
|
TGCTGGCCTGAGCCCCAGCTCCTGTCTGGAGACTGCCAGCATGGAAGGAGAGGCGGGGGC
TGGCAGCTCCAGGGGGCTCCTCTAGCCTTCTGAGCAGAGGCCCTGCAGCCTGGGAGGCAG
GGCTGGACTCGGCAAGGCCCAGCTGGTTTCCCTGCCCCTGGAGCTTGCCCGAGTCTCTCT
GGGGACCTTAGGATCAGCTTCTGCTTTGCACTATGTTCACTTTGAGGCTTGGTTCTCATG
CATCCCAGGATCTCCGGGGAGGTGGCTGCTTGCTTTCTAGAATGAGGGTTCCTAAATCTT
ACACCTGTCTGCCTCTGCAGGGGCAGTTCCAGCAGGATGAATGGCAAGATGAGGTACTGA
AGCCATGACGTCCATCCAGGCCAAAGCAGGGGGCCCTGGGATGCTTCTTAAGCAGGTGTA
GAATGGGGCTCCCACCCAAGCCCAGTCAGCCTGGGAGGGTTCACTGGCCCCCCTCCTTCC
CTGGGACCACATCAGGGACCCCAGCAAAGCTGCTGACATTTTATTAGCATTATTATTTGA
CAGAGTAAACTTGTTCCTCTTCCCCTGAAGGACTTTACTATCTGGTCATCCCACCCTCTT
CAGAGTCAACTGCACATTTGGGGGCAGTGGGGGGGACATTGGCAGGACCCTCTGTCTTAC
CCCTCCCTCTGGCCTGGGGGCCAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTGGCCTGAGCCCCAGCTCCTGTCTGGAGACTGCCAGCATGGAAGGAGAGGCGGGGGC
TGGCAGCTCCAGGGGGCTCCTCTAGCCTTCTGAGCAGAGGCCCTGCAGCCTGGGAGGCAG
GGCTGGACTCGGCAAGGCCCAGCTGGTTTCCCTGCCCCTGGAGCTTGCCCGAGTCTCTCT
GGGGACCTTAGGATCAGCTTCTGCTTTGCACTATGTTCACTTTGAGGCTTGGTTCTCATG
CATCCCAGGATCTCCGGGGAGGTGGCTGCTTGCTTTCTAGAATGAGGGTTCCTAAATCTT
ACACCTGTCTGCCTCTGCAGGGGCAGTTCCAGCAGGATGAATGGCAAGATGAGGTACTGA
AGCCATGACGTCCATCCAGGCCAAAGCAGGGGGCCCTGGGATGCTTCTTAAGCAGGTGTA
GAATGGGGCTCCCACCCAAGCCCAGTCAGCCTGGGAGGGTTCACTGGCCCCCCTCCTTCC
CTGGGACCACATCAGGGACCCCAGCAAAGCTGCTGACATTTTATTAGCATTATTATTTGA
CAGAGTAAACTTGTTCCTCTTCCCCTGAAGGACTTTACTATCTGGTCATCCCACCCTCTT
CAGAGTCAACTGCACATTTGGGGGCAGTGGGGGGGACATTGGCAGGACCCTCTGTCTTAC
CCCTCCCTCTGGCCTGGGGGCCAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
370-565, 147305 MARC 4BOV Bos taurus cDNA 5', mRNA sequence (gb|BE663486.1|),
blast E-value=7e-32, identity=85.5% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
370-565, 147305 MARC 4BOV Bos taurus cDNA 5', mRNA sequence (gb|BE663486.1|),
blast E-value=7e-32, identity=85.5% |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
