Non-Coding RNA Search

Ss1.1-rpigcb_4250.5

Sequence:


               
               CAGCCACAGAGGCAGCCCATGTTGTCAGCACCATCCCTGAGTCATTACAATAGTACCCTG
GGGCTACATGGGAAAACTGAGAATGGGACCCTGCTAGACTGGAGAGTAGGTGAGAGAAGT
GCTTCTTTCTGCCTTCTTGGTGGCAAACAGAGAACCACCTCATGATACAATTCAAGAAAG
AAGAGAAAAACGAAGCTGCTCTGTTTTTTTTGCAATCCACCCATCTACTTGGAAAGCACT
GGAACTCAGACACAGGGGAGCAGCATTTCTCCAATGGCACACATTACCCTACATCTTCCA
CTGTTGCCTGGTGGAGATTTTTTTCTATACCTTCCTAAATTGCTTTTCTGTCTGTATTTG
TTTGTGTTAAAATAGTTATCTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCACAGAGGCAGCCCATGTTGTCAGCACCATCCCTGAGTCATTACAATAGTACCCTG
GGGCTACATGGGAAAACTGAGAATGGGACCCTGCTAGACTGGAGAGTAGGTGAGAGAAGT
GCTTCTTTCTGCCTTCTTGGTGGCAAACAGAGAACCACCTCATGATACAATTCAAGAAAG
AAGAGAAAAACGAAGCTGCTCTGTTTTTTTTGCAATCCACCCATCTACTTGGAAAGCACT
GGAACTCAGACACAGGGGAGCAGCATTTCTCCAATGGCACACATTACCCTACATCTTCCA
CTGTTGCCTGGTGGAGATTTTTTTCTATACCTTCCTAAATTGCTTTTCTGTCTGTATTTG
TTTGTGTTAAAATAGTTATCTTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-384, gnl|bosTau2|chr3 (18749138-18748750)
               

               
               1-384, gnl|Hg17|chr1 (158660050-158660438)
               

               
               1-384, gnl|Mm7|chr1 (170686407-170686075)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr3 (18749138-18748750)
               

               
               1-384, gnl|Hg17|chr1 (158660050-158660438)
               

               
               1-384, gnl|Mm7|chr1 (170686407-170686075)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-384, gnl\|bosTau2\|chr3 (18749138-18748750)
	1-384, gnl\|Hg17\|chr1 (158660050-158660438)
	1-384, gnl\|Mm7\|chr1 (170686407-170686075)