Non-Coding RNA Search

Ss1.1-rpigcb_4963.5

Sequence:


               
               CATCCTGCCAGCCACCTCTACTTCTGTCCCTCTCCCTGCCACTTGGAGATTCCCCCCCCA
GAGGCCCCAGGCAGCAGAATCATGGCTATTCCTCTAAGGGGGATCCCAGCCCCTCTCTGC
ATTTTCAGAGCCTGTGGATGTTAGGTCCTGATGGGGTGGGATGGAGTTGAGCATGTTGAT
CCAGAATTTTCTGAGATTCTTACTTTAGCATAATTTTCTTTTTTATTGCCGCGCGTCTCT
AGCTCCGGCGCGGTGGTCCTGACCGTATCCGGAATCGCAGGGGGTCGCCGCTGGAGAGGG
GCTCGGCGCCCGGCGGGGACTGCAGGCGATGACTCAGGACGCAGCCAGGGGCCACGACGT
GCACGGAGGACCGCATCCAGCACGCCCTGGAGCGCTGCTTGCACGGGCTCAGCCTCAGCC
GCCGCTCCACCTCCTGGTCAGCTGGGCTGTGTCTAAACTGTTGGAGCCTGCAGGAGCTGG
TCAGCAGGGATCCGGGCCACTTCCTTATCCTCCTGGAGCAGATCCTGCAGAAAACCCGAG
AGGTCCAAGAGAAGGGCACCTATGACCTCCTCGCGCCCCTGGCCCTGCTCTTCTATTCTA
CTGTCCTCTGTACGCCACACTTCCCGCCAGACTCAGATCTCCTTCTGAAAGCAGCCAGAA
CCTACCACCGATTCCTGACCTGGCCGGTTCCGTACTGCAGCATCTGCCAGGAACTGCTCA
CCTTCATCGATGCTGAGCTGAAGGCCCCAGGTAAGTGCGGAGGCAGCCCGCACGTGGGCC
AGGGGCCACACGGTCAGGAGGTTTCCAGCTCTTCCGAAACTAGGCTTTGGCCATGGCCCT
TCTTGCCCCCTATCCCTCAGCTCACCTCTGCCCTCCACCTGCTTCACAGCCTCGGAGTCC
CCTCTTCACGGTGCTGGGTGCATCACAGTTCATCAGTCGTCAGGCGATAACTCAAGGAGG
AATTCTAGGGTAACCTGGGCAAGGGTTCAGGACAAGGAGGCCCCGCCTGTGCCTCTGCTC
TGGTTAGCCAAGGGGTCTCCGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCCTGCCAGCCACCTCTACTTCTGTCCCTCTCCCTGCCACTTGGAGATTCCCCCCCCA
GAGGCCCCAGGCAGCAGAATCATGGCTATTCCTCTAAGGGGGATCCCAGCCCCTCTCTGC
ATTTTCAGAGCCTGTGGATGTTAGGTCCTGATGGGGTGGGATGGAGTTGAGCATGTTGAT
CCAGAATTTTCTGAGATTCTTACTTTAGCATAATTTTCTTTTTTATTGCCGCGCGTCTCT
AGCTCCGGCGCGGTGGTCCTGACCGTATCCGGAATCGCAGGGGGTCGCCGCTGGAGAGGG
GCTCGGCGCCCGGCGGGGACTGCAGGCGATGACTCAGGACGCAGCCAGGGGCCACGACGT
GCACGGAGGACCGCATCCAGCACGCCCTGGAGCGCTGCTTGCACGGGCTCAGCCTCAGCC
GCCGCTCCACCTCCTGGTCAGCTGGGCTGTGTCTAAACTGTTGGAGCCTGCAGGAGCTGG
TCAGCAGGGATCCGGGCCACTTCCTTATCCTCCTGGAGCAGATCCTGCAGAAAACCCGAG
AGGTCCAAGAGAAGGGCACCTATGACCTCCTCGCGCCCCTGGCCCTGCTCTTCTATTCTA
CTGTCCTCTGTACGCCACACTTCCCGCCAGACTCAGATCTCCTTCTGAAAGCAGCCAGAA
CCTACCACCGATTCCTGACCTGGCCGGTTCCGTACTGCAGCATCTGCCAGGAACTGCTCA
CCTTCATCGATGCTGAGCTGAAGGCCCCAGGTAAGTGCGGAGGCAGCCCGCACGTGGGCC
AGGGGCCACACGGTCAGGAGGTTTCCAGCTCTTCCGAAACTAGGCTTTGGCCATGGCCCT
TCTTGCCCCCTATCCCTCAGCTCACCTCTGCCCTCCACCTGCTTCACAGCCTCGGAGTCC
CCTCTTCACGGTGCTGGGTGCATCACAGTTCATCAGTCGTCAGGCGATAACTCAAGGAGG
AATTCTAGGGTAACCTGGGCAAGGGTTCAGGACAAGGAGGCCCCGCCTGTGCCTCTGCTC
TGGTTAGCCAAGGGGTCTCCGAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               322-446, gnl|bosTau2|chr19 (21190946-21190822)
               

               
               322-446, gnl|Hg17|chr17 (8755553-8755429)
               

               
               322-446, gnl|Mm7|chr11 (68555365-68555489)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               322-446, gnl|bosTau2|chr19 (21190946-21190822)
               

               
               322-446, gnl|Hg17|chr17 (8755553-8755429)
               

               
               322-446, gnl|Mm7|chr11 (68555365-68555489)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	322-446, gnl\|bosTau2\|chr19 (21190946-21190822)
	322-446, gnl\|Hg17\|chr17 (8755553-8755429)
	322-446, gnl\|Mm7\|chr11 (68555365-68555489)