Non-Coding RNA Search

Ss1.1-rpigcb_5988.5

Sequence:


               
               AGAACCATGATGCTGCTGACATTTCAGATGCACTAATCCTTGCCGGCCCGTTCCCACTTC
CTGATGTGACAGAAGCTGATTATACCAAAACAAACCATATGCGGAATCTGCCCAAGAAGT
CCCGTTGATACCACTTATTCTAGCGTGGGCAAAAAAATTAGCTATTTTCCATGATTATGC
CTCTCAGCAACTGGGAGAACCGGCAAGTTACCGAGCTTCAGTGTGATTTTATCTTTCATT
CTCTGTTCTCTTGCCCACTTTTAAGATCATTCTCAAACGTTTACTGAAAACAAAGGTGTG
AGGCCTTCTGAGGATGGGAAGCCATAGAGCAGCAATATAAGCCATCTGCAGATGCAACAA
AAATCCAGAATATTCTTGGAGCACAGATCAAAATCCTACACTGGCTTGTTTTGCTTCTGA
AATAAATACTGAGATGGGGGTGGGAAGACAACAGGCATCATTAGTTAAGTGAAAGCAACC
CAGGTTCCTGCCCCCCAGAGTTTCTGCTTCAGTAAATATTTTACTTCCTCCTCAATTTTA
CCAAGTGACAGTGATTGTTTGGCAGTGTCAGAGCTCACTGCTTTGTGGATGCCAGGAACA
GCTTTGAGCCTGAGGGCTGGAGGGCCAGGGTAGATATTTCCAATAGATGAACAGGTCTTG
GCCTGTGGACCTGGCATTTCCTTAACTAGAATCTAAATTCTAATTAGATTCTAATGGCAA
ATAAACATTCAATCATTAAAAAAAACTGTTTATTGAGTCCCTGTTGTGCGCCGGCCACTC
TTCTAGATGCTTAAAATAGATCCGTATAGGAAAAAGATCAAGATCCCTGCCCTTGTGCAG
CTTATGGTCTAGTAGACATTAAACATGATAATAAGTGTAAATTTACAATATGGTAAACAG
TTGTAAATGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAACCATGATGCTGCTGACATTTCAGATGCACTAATCCTTGCCGGCCCGTTCCCACTTC
CTGATGTGACAGAAGCTGATTATACCAAAACAAACCATATGCGGAATCTGCCCAAGAAGT
CCCGTTGATACCACTTATTCTAGCGTGGGCAAAAAAATTAGCTATTTTCCATGATTATGC
CTCTCAGCAACTGGGAGAACCGGCAAGTTACCGAGCTTCAGTGTGATTTTATCTTTCATT
CTCTGTTCTCTTGCCCACTTTTAAGATCATTCTCAAACGTTTACTGAAAACAAAGGTGTG
AGGCCTTCTGAGGATGGGAAGCCATAGAGCAGCAATATAAGCCATCTGCAGATGCAACAA
AAATCCAGAATATTCTTGGAGCACAGATCAAAATCCTACACTGGCTTGTTTTGCTTCTGA
AATAAATACTGAGATGGGGGTGGGAAGACAACAGGCATCATTAGTTAAGTGAAAGCAACC
CAGGTTCCTGCCCCCCAGAGTTTCTGCTTCAGTAAATATTTTACTTCCTCCTCAATTTTA
CCAAGTGACAGTGATTGTTTGGCAGTGTCAGAGCTCACTGCTTTGTGGATGCCAGGAACA
GCTTTGAGCCTGAGGGCTGGAGGGCCAGGGTAGATATTTCCAATAGATGAACAGGTCTTG
GCCTGTGGACCTGGCATTTCCTTAACTAGAATCTAAATTCTAATTAGATTCTAATGGCAA
ATAAACATTCAATCATTAAAAAAAACTGTTTATTGAGTCCCTGTTGTGCGCCGGCCACTC
TTCTAGATGCTTAAAATAGATCCGTATAGGAAAAAGATCAAGATCCCTGCCCTTGTGCAG
CTTATGGTCTAGTAGACATTAAACATGATAATAAGTGTAAATTTACAATATGGTAAACAG
TTGTAAATGCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-331, gnl|bosTau2|chr17 (12311670-12312000)
               

               
               3-331, gnl|Hg17|chr4 (141103358-141103028)
               

               
               3-331, gnl|Mm7|chr3 (51925000-51924481)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-331, gnl|bosTau2|chr17 (12311670-12312000)
               

               
               3-331, gnl|Hg17|chr4 (141103358-141103028)
               

               
               3-331, gnl|Mm7|chr3 (51925000-51924481)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	3-331, gnl\|bosTau2\|chr17 (12311670-12312000)
	3-331, gnl\|Hg17\|chr4 (141103358-141103028)
	3-331, gnl\|Mm7\|chr3 (51925000-51924481)