Non-Coding RNA Search

Ss1.1-rpigcb_6311.5

Sequence:


               
               CCAGGCCTCGAGGTCATGGGAGGAAAGGTGAAGATGCTCTTTGCCGGTATTTCAGTAATG
AGCGGATCCCGCCCATCATCGAAGAAAGCTCGGCGCCCCCGTACCGCTTCTCCAGGCCCC
CCACGGAGAGGCAGCTGGTCCGCGGCGCAGACTACATCCGAGGCAGCAGGTGCTACCTCA
GTTCGGATCTGCACAGCAGCGCCACGATTCCGTTCCAGGAGGAAGGGACCAAAAAGAAAG
CTGGGCCCTCGGCAGCCAGGTCCTCTTCCGCTGAACCGTCCCTGTTGGTCAGCTGGTTTA
CCCGCCTGAAACTTTTGACTCACTGAGCCCTGCACTCCCTGGCTTCTCCCCGTTTCCTGT
CACCAAGTGCCTTGCTTCCTCGGTTGACAACCTGTTCTGATTTTCATCCGCAGTATTATG
TAGCGACTTTATGCAATTCCGTGGGGTTTTTTTTGGTTTTGTTTTGTTGTTGTTGTTGTT
TTAACATCGTGTACTGCCCTTCTGGGAATTTTGAAGTCATTGGATGGGAACAAATCCAGA
GGATCTTAGGTGAGGCTTGTGGAGACTGAAGGAGAAGAATGATTCAAGTCTGATTTTTTT
TTTTTTTTGCTTTCTTGAGAGTCAGAATATAGAGACATGCTCTATAAACCGGAGCCTCAG
CCAGGAATGTTGTGGTCGTTATGAGGAACTGGGCCGTTTTTCATTTTGGGGTGGGGCTGA
AATGGGTGGCCCCTGTCACACTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGGCCTCGAGGTCATGGGAGGAAAGGTGAAGATGCTCTTTGCCGGTATTTCAGTAATG
AGCGGATCCCGCCCATCATCGAAGAAAGCTCGGCGCCCCCGTACCGCTTCTCCAGGCCCC
CCACGGAGAGGCAGCTGGTCCGCGGCGCAGACTACATCCGAGGCAGCAGGTGCTACCTCA
GTTCGGATCTGCACAGCAGCGCCACGATTCCGTTCCAGGAGGAAGGGACCAAAAAGAAAG
CTGGGCCCTCGGCAGCCAGGTCCTCTTCCGCTGAACCGTCCCTGTTGGTCAGCTGGTTTA
CCCGCCTGAAACTTTTGACTCACTGAGCCCTGCACTCCCTGGCTTCTCCCCGTTTCCTGT
CACCAAGTGCCTTGCTTCCTCGGTTGACAACCTGTTCTGATTTTCATCCGCAGTATTATG
TAGCGACTTTATGCAATTCCGTGGGGTTTTTTTTGGTTTTGTTTTGTTGTTGTTGTTGTT
TTAACATCGTGTACTGCCCTTCTGGGAATTTTGAAGTCATTGGATGGGAACAAATCCAGA
GGATCTTAGGTGAGGCTTGTGGAGACTGAAGGAGAAGAATGATTCAAGTCTGATTTTTTT
TTTTTTTTGCTTTCTTGAGAGTCAGAATATAGAGACATGCTCTATAAACCGGAGCCTCAG
CCAGGAATGTTGTGGTCGTTATGAGGAACTGGGCCGTTTTTCATTTTGGGGTGGGGCTGA
AATGGGTGGCCCCTGTCACACTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61845633|ref|XP_583277.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61845633|ref|XP_583277.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-744, gnl|bosTau2|chr9 (54723834-54724549)
               

               
               26-744, gnl|Hg17|chr6 (154819901-154819214)
               

               
               26-744, gnl|Mm7|chr10 (3225953-3226641)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-744, gnl|bosTau2|chr9 (54723834-54724549)
               

               
               26-744, gnl|Hg17|chr6 (154819901-154819214)
               

               
               26-744, gnl|Mm7|chr10 (3225953-3226641)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               che (0.136314)
               

               
               nmm (0.132802)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               nmm (0.132802)
               

               
               cty (0.10408)

	26-744, gnl\|bosTau2\|chr9 (54723834-54724549)
	26-744, gnl\|Hg17\|chr6 (154819901-154819214)
	26-744, gnl\|Mm7\|chr10 (3225953-3226641)