Non-Coding RNA Search

Ss1.1-rpigcb_6758.5

Sequence:


               
               ATGAGGAGTGTTTCCAGACTCAGCAAGCCCTGAGCCTGCCCAAGTCCAGTCAGAAGTGTG
TTCGTGGGGATCAATCCGATCCTGGCCCTTTCTTCCACATTTTCAGTTGTAATTCCCCAA
AGCAGATCCTCCCAAGCAGGTTCCTTATTGCTCACGTATCTTGGGGTCATCGCCTTCCAA
GTATTGTACAGAATACCTTGTGGAGCAGTGAAACGTGCTCAGAGAAGTAATCAGCTGAAC
TGGAAGATCCACCTAGGGATTCATATCAGCTAAATACTAGTGGTTGATTTTGTTTAATTT
GCTCATAATTTTAAAAGCTGCAATATAATATAAGGAGAGACCAGAGGTAATTTCTCCTGT
CATTTGGTTTAGCTGGGGGTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAGGAGTGTTTCCAGACTCAGCAAGCCCTGAGCCTGCCCAAGTCCAGTCAGAAGTGTG
TTCGTGGGGATCAATCCGATCCTGGCCCTTTCTTCCACATTTTCAGTTGTAATTCCCCAA
AGCAGATCCTCCCAAGCAGGTTCCTTATTGCTCACGTATCTTGGGGTCATCGCCTTCCAA
GTATTGTACAGAATACCTTGTGGAGCAGTGAAACGTGCTCAGAGAAGTAATCAGCTGAAC
TGGAAGATCCACCTAGGGATTCATATCAGCTAAATACTAGTGGTTGATTTTGTTTAATTT
GCTCATAATTTTAAAAGCTGCAATATAATATAAGGAGAGACCAGAGGTAATTTCTCCTGT
CATTTGGTTTAGCTGGGGGTGGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-202, gnl|bosTau2|chrX (19457898-19457696)
               

               
               1-202, gnl|Hg17|chrX (110345341-110345136)
               

               
               1-202, gnl|Mm7|chrX (138522314-138522111)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-202, gnl|bosTau2|chrX (19457898-19457696)
               

               
               1-202, gnl|Hg17|chrX (110345341-110345136)
               

               
               1-202, gnl|Mm7|chrX (138522314-138522111)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ecc (0.115035)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)
               

               
               cty (0.10408)

	1-202, gnl\|bosTau2\|chrX (19457898-19457696)
	1-202, gnl\|Hg17\|chrX (110345341-110345136)
	1-202, gnl\|Mm7\|chrX (138522314-138522111)