Non-Coding RNA Search

Ss1.1-rpigcb_6802.5

Sequence:


               
               GGCAAAGCAAAATTGTATTTGGAAACTAGGAAAATTAAGGAACCAAATAGATTGGTTTTG
CTTCCTTGCCATGGATTCTGGAAGGACATAGTTCTTCTAAAATTTCCTGTTAATTGGCAT
GTATGTCTCATTTAAAGCAAATTAAGTAGGACAAGCAAGTCAGCAAAATAGAAGTATTAA
AAGAATCATCCTTTTAATCACAGATCTTATTTTGGGATTAAAAACTTCTAGCTTTAGCCA
GGTGTGCATGTTGCTGCCATTTTGCATTTTTGAATCATCTTGTGTAATTGTCACCATGAA
AGTGTTATTCAGAATGGTCATAGATTTTTTTTCATCTTTGTGCAAAAACATGGAAAATGG
TCACTGACTTTGTGTTGAGGTTTCCCCCATTTTGCTGCCTTTTGGGACACTATTTTGGTT
AAATACTTGGTCTTGGCTGCATTCTTTTTTTTTTTTTTTTTTCCTGTGGGGTTCAAAAGA
ATAAACATTTTCTTACAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAAAGCAAAATTGTATTTGGAAACTAGGAAAATTAAGGAACCAAATAGATTGGTTTTG
CTTCCTTGCCATGGATTCTGGAAGGACATAGTTCTTCTAAAATTTCCTGTTAATTGGCAT
GTATGTCTCATTTAAAGCAAATTAAGTAGGACAAGCAAGTCAGCAAAATAGAAGTATTAA
AAGAATCATCCTTTTAATCACAGATCTTATTTTGGGATTAAAAACTTCTAGCTTTAGCCA
GGTGTGCATGTTGCTGCCATTTTGCATTTTTGAATCATCTTGTGTAATTGTCACCATGAA
AGTGTTATTCAGAATGGTCATAGATTTTTTTTCATCTTTGTGCAAAAACATGGAAAATGG
TCACTGACTTTGTGTTGAGGTTTCCCCCATTTTGCTGCCTTTTGGGACACTATTTTGGTT
AAATACTTGGTCTTGGCTGCATTCTTTTTTTTTTTTTTTTTTCCTGTGGGGTTCAAAAGA
ATAAACATTTTCTTACAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-505, gnl|bosTau2|chr2 (80316405-80316903)
               

               
               1-505, gnl|Mm7|chr4 (134181690-134181196)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-505, gnl|bosTau2|chr2 (80316405-80316903)
               

               
               1-505, gnl|Mm7|chr4 (134181690-134181196)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               lnt (0.142308)
               

               
               ecc (0.115035)
               

               
               cty (0.10408)
               

               
               nbm (0.0993246)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               ecc (0.115035)
               

               
               cty (0.10408)
               

               
               nbm (0.0993246)

	1-505, gnl\|bosTau2\|chr2 (80316405-80316903)
	1-505, gnl\|Mm7\|chr4 (134181690-134181196)