Non-Coding RNA Search

Ss1.1-rpigcb_6865.5

Sequence:


               
               GGCGGCGGCGGCGGGGGGGCAGCCAGAGGGGCAGAGGAGGAACCGCCGCCGCCCCTACAA
GCAGTTCTGGTGGCCGACAGCTTCAACCGCCGTTTCTTCCCTATCTCCAAGGACCAGCCT
CGGGCCCTCTTGCCCCTGGCCAATGTGGCACTAATTGACTACACTCTGGAATTTCTGACT
GCCACAGGTGTACAGGAAACCTTTGTCTTTTGTTGCTGGAAGGCTGCTCAAATCAAGGAA
CATTTACTGAAATCCAAGTGGTGTCGCCCTACATCCCTCAATGTGGTTCGAATAATAACA
TCAGACCTATATAGATCACTGGGGGACGTTCTCCGTGATGTTGATGCTAAGGCTTTGGTG
CGCTCTGACTTCCTTCTGGTGTATGGGGATGTCATCTCTAACATCAATGTCACCAGAGCC
CTGGAAGAACACAGGTTAAGACGGAAGCTAGAAAAAAATGTATCTGTGATGACGATGATC
TTCAAGGAGTCATCCCCCAGCCACCCAACTCGTTGCCATGAGGACAACGTGGTAGTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGCGGCGGCGGGGGGGCAGCCAGAGGGGCAGAGGAGGAACCGCCGCCGCCCCTACAA
GCAGTTCTGGTGGCCGACAGCTTCAACCGCCGTTTCTTCCCTATCTCCAAGGACCAGCCT
CGGGCCCTCTTGCCCCTGGCCAATGTGGCACTAATTGACTACACTCTGGAATTTCTGACT
GCCACAGGTGTACAGGAAACCTTTGTCTTTTGTTGCTGGAAGGCTGCTCAAATCAAGGAA
CATTTACTGAAATCCAAGTGGTGTCGCCCTACATCCCTCAATGTGGTTCGAATAATAACA
TCAGACCTATATAGATCACTGGGGGACGTTCTCCGTGATGTTGATGCTAAGGCTTTGGTG
CGCTCTGACTTCCTTCTGGTGTATGGGGATGTCATCTCTAACATCAATGTCACCAGAGCC
CTGGAAGAACACAGGTTAAGACGGAAGCTAGAAAAAAATGTATCTGTGATGACGATGATC
TTCAAGGAGTCATCCCCCAGCCACCCAACTCGTTGCCATGAGGACAACGTGGTAGTGGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               123-252, gnl|bosTau2|chr1 (51303570-51303441)
               

               
               123-252, gnl|Hg17|chr3 (185337101-185337230)
               

               
               123-252, gnl|Mm7|chr16 (20050205-20050334)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               123-252, gnl|bosTau2|chr1 (51303570-51303441)
               

               
               123-252, gnl|Hg17|chr3 (185337101-185337230)
               

               
               123-252, gnl|Mm7|chr16 (20050205-20050334)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cty (0.20816)
               

               
               cly (0.120642)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)
               

               
               cly (0.120642)

	123-252, gnl\|bosTau2\|chr1 (51303570-51303441)
	123-252, gnl\|Hg17\|chr3 (185337101-185337230)
	123-252, gnl\|Mm7\|chr16 (20050205-20050334)