Non-Coding RNA Search

Ss1.1-rpigcb_7186.5

Sequence:


               
               GCGGCGTCGGGGACGCGGCGGCTGCGGGACGCGGGACCTCCAGCTCAGAGCTCGGCCTAC
TCAATGGCAGTTGCTCTCATTTCATTTTTAGGTTTAAAAGCTTCAACTGGAATCGGTTTG
CATTCGGAAATTGCACCAACACAAATCGGACTTGATATTGTGGATTGACTAGCAAATAAG
CAATGTCATCTAATGAACAAGAAAGGCTCTTATGTTATAATGGGGAAGTCCTTGTTTTTT
GTTTGTCCAAAGGGAATTTTGTAGATAAAGGGCCTGCAGAAATAACCATGATACATGTCA
GAAGAATGACATTTGACAGAGGAACAGGAGTATTTGTTCAGAAGTCCACTGGATCCTTTA
GCATAAAAGAAGAATACTCTCATTTAAAAATTATGTGTTGCAACTCTGTTTCAGATTTCA
GAACTGGAATTAATCTGCCTTACGTTATGATACAGTGCAATAAAGAGAATAACATTTTCA
GATACTTTCTACTATTTCTTCACAGTACCAATAAATTTGAAAAGCGTTTGAGTTTTAGAC
TAGGCTATGAATTGAAAGACAGCATAAGGGTCCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCGTCGGGGACGCGGCGGCTGCGGGACGCGGGACCTCCAGCTCAGAGCTCGGCCTAC
TCAATGGCAGTTGCTCTCATTTCATTTTTAGGTTTAAAAGCTTCAACTGGAATCGGTTTG
CATTCGGAAATTGCACCAACACAAATCGGACTTGATATTGTGGATTGACTAGCAAATAAG
CAATGTCATCTAATGAACAAGAAAGGCTCTTATGTTATAATGGGGAAGTCCTTGTTTTTT
GTTTGTCCAAAGGGAATTTTGTAGATAAAGGGCCTGCAGAAATAACCATGATACATGTCA
GAAGAATGACATTTGACAGAGGAACAGGAGTATTTGTTCAGAAGTCCACTGGATCCTTTA
GCATAAAAGAAGAATACTCTCATTTAAAAATTATGTGTTGCAACTCTGTTTCAGATTTCA
GAACTGGAATTAATCTGCCTTACGTTATGATACAGTGCAATAAAGAGAATAACATTTTCA
GATACTTTCTACTATTTCTTCACAGTACCAATAAATTTGAAAAGCGTTTGAGTTTTAGAC
TAGGCTATGAATTGAAAGACAGCATAAGGGTCCTTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|33392713|gb|AAH55411.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33392713|gb|AAH55411.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               49-576, gnl|bosTau2|chrX (40809369-40808842)
               

               
               49-576, gnl|Hg17|chrX (14643403-14642878)
               

               
               49-576, gnl|Mm7|chrX (159756751-159757285)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-576, gnl|bosTau2|chrX (40809369-40808842)
               

               
               49-576, gnl|Hg17|chrX (14643403-14642878)
               

               
               49-576, gnl|Mm7|chrX (159756751-159757285)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	49-576, gnl\|bosTau2\|chrX (40809369-40808842)
	49-576, gnl\|Hg17\|chrX (14643403-14642878)
	49-576, gnl\|Mm7\|chrX (159756751-159757285)