Non-Coding RNA Search

Ss1.1-rpigcb_7313.5

Sequence:


               
               GGCACATCCTCTCGAAGCTCCGTTCGGCCGCAGGGGACAGAAACCAGTCAAGTTTGCCTG
ACATCCATCAGCCAGGGCCTGGACCACCTGGTCTCAGCCCAGCTCTGCCTGCCTTGCTGT
GTGATCTAGGCTCCCTGCCCCACCCACAGCCATGGCCACGATGGTGGCCCAGAAGCTCAG
CCACCTCCTGCCCAGTTTGCGACAGGTCCATCCGGAGCCTCAGCCGTCTGTGCACCCAGA
GCCTGTGTTCACTGTGGACCGAGCTGAGGTGCCGCCCCTCTTCTGGAAGCCATACATCTA
CGTGGGCTACCGGCCGCTGCATCAGACCTGGCGGTTCTACTTCCGCACACTGTTCCAGCA
GCACAACGAGGCGGTGAACGTCTGGACCCACCTGCTGGCTGCCCTGGTGCTGCTGCTGCG
GCTGGCCATCTTTGTGGGGACCGTGGACTTCTGGGGAGACCCACATGCCCTGCCCCTCTT
CATCATTGTCCTGGCCTCCTTCACCTACCTCTCCCTCAGTGCCTTGGCTCACCTCCTGCA
GGCCAAGTCTGAGTTCTGGCATTACAGCTTCTTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCACATCCTCTCGAAGCTCCGTTCGGCCGCAGGGGACAGAAACCAGTCAAGTTTGCCTG
ACATCCATCAGCCAGGGCCTGGACCACCTGGTCTCAGCCCAGCTCTGCCTGCCTTGCTGT
GTGATCTAGGCTCCCTGCCCCACCCACAGCCATGGCCACGATGGTGGCCCAGAAGCTCAG
CCACCTCCTGCCCAGTTTGCGACAGGTCCATCCGGAGCCTCAGCCGTCTGTGCACCCAGA
GCCTGTGTTCACTGTGGACCGAGCTGAGGTGCCGCCCCTCTTCTGGAAGCCATACATCTA
CGTGGGCTACCGGCCGCTGCATCAGACCTGGCGGTTCTACTTCCGCACACTGTTCCAGCA
GCACAACGAGGCGGTGAACGTCTGGACCCACCTGCTGGCTGCCCTGGTGCTGCTGCTGCG
GCTGGCCATCTTTGTGGGGACCGTGGACTTCTGGGGAGACCCACATGCCCTGCCCCTCTT
CATCATTGTCCTGGCCTCCTTCACCTACCTCTCCCTCAGTGCCTTGGCTCACCTCCTGCA
GGCCAAGTCTGAGTTCTGGCATTACAGCTTCTTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               130-576, gnl|bosTau2|chr2 (79956948-79957394)
               

               
               130-576, gnl|Hg17|chr1 (25874496-25874055)
               

               
               130-576, gnl|Mm7|chr4 (133885247-133885686)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-576, gnl|bosTau2|chr2 (79956948-79957394)
               

               
               130-576, gnl|Hg17|chr1 (25874496-25874055)
               

               
               130-576, gnl|Mm7|chr4 (133885247-133885686)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	130-576, gnl\|bosTau2\|chr2 (79956948-79957394)
	130-576, gnl\|Hg17\|chr1 (25874496-25874055)
	130-576, gnl\|Mm7\|chr4 (133885247-133885686)