Non-Coding RNA Search

Ss1.1-rpigcb_7345.5

Sequence:


               
               GAGACTTTATGTTCAACAAGTAATTCTGCAACAATTCAGACTTCAGACTAAAACATTGGG
AACTAACTAATCAACATAGAATTTTACTAAAGTCTTCTTGGGAACTTCTAAGACAGTGTA
ATAAGTAACACGTCCTTTAAAATACAAAATGTTTATGTGCGCAAAAAAAGTAAAAAGATA
GTAAAATCTGTTTATCTTAGGAATATTTTTCTAACACCCAGTTCATCAAGTCTTCAGATT
AAGCACATTAAGTTACCTATATATTATTTTCCATATGTGTTCTACAATTAGAGGTTCTGC
CTTATTTGGTTAGAGTAATTTTGGAAATTCTGTTCTTGAAACAAATTTTTGATAAAACAA
ATTATTAAATTTGGTTTTGGGACATCTAAATTGAATGCTAGAAGTGAAGCAGAAGTAAAA
TGTTGAGTCAGTGCCATTTAGATTTTTAAAAGGTGGGTCTTGAGGATGATAGTTGTGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACTTTATGTTCAACAAGTAATTCTGCAACAATTCAGACTTCAGACTAAAACATTGGG
AACTAACTAATCAACATAGAATTTTACTAAAGTCTTCTTGGGAACTTCTAAGACAGTGTA
ATAAGTAACACGTCCTTTAAAATACAAAATGTTTATGTGCGCAAAAAAAGTAAAAAGATA
GTAAAATCTGTTTATCTTAGGAATATTTTTCTAACACCCAGTTCATCAAGTCTTCAGATT
AAGCACATTAAGTTACCTATATATTATTTTCCATATGTGTTCTACAATTAGAGGTTCTGC
CTTATTTGGTTAGAGTAATTTTGGAAATTCTGTTCTTGAAACAAATTTTTGATAAAACAA
ATTATTAAATTTGGTTTTGGGACATCTAAATTGAATGCTAGAAGTGAAGCAGAAGTAAAA
TGTTGAGTCAGTGCCATTTAGATTTTTAAAAGGTGGGTCTTGAGGATGATAGTTGTGATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-467, gnl|bosTau2|chr11 (30335268-30335732)
               

               
               2-467, gnl|Hg17|chr2 (61189727-61190149)
               

               
               2-467, gnl|Mm7|chr11 (23600027-23599571)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-467, gnl|bosTau2|chr11 (30335268-30335732)
               

               
               2-467, gnl|Hg17|chr2 (61189727-61190149)
               

               
               2-467, gnl|Mm7|chr11 (23600027-23599571)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	2-467, gnl\|bosTau2\|chr11 (30335268-30335732)
	2-467, gnl\|Hg17\|chr2 (61189727-61190149)
	2-467, gnl\|Mm7\|chr11 (23600027-23599571)