Ss1.1-rpigcb_7417.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCCCCGGGAAGATCTCTACTGTCCCCCCATCGTGGTCAAGGTCATTGATAACCGGCAG TTTGGCCGCCGGCCTGTGGTGGGCCAGTGTACCATCCGCTCCCTGGAGAGCTTCCTGTGT GACCCTTACTCAGAGGAGAGTCCGTCCCCACAGGGCGGCCCAGATGACGTGAGCTTGCTC AGTCCTGGGGAAGACGTGCTGATTGACATCGACGACAAGGAACCCCTCATCCCCATCCAG GAGGAGGAGTTTATTGACTGGTGGAGCAAATTCTTCGCCTCGATTGGGGAGAGGGAAAAG TGTGGGTCCTACCTGGAGAAGGACTTTGACACTCTAAAGGTCTATGATACCCCGCTGGAG AATGTGAAGGCTTTTGAGGGCCTGTCTGTTTTTTGTAACACCTTCAAGCTCTACCGGGGC AAGACTCAGGAGGAGATGGAAGACCCATCTGTCATTGGGGAATTTAAGGGCCTCTTCAAA ATTTATCCCCTCCCAGAAGACCCTGCCATTCCCATGCCTCCAAGACAGTTCCACCAGCTG GCCTCCCAGGAGCCCCAGGAGTGCCTGGTCCGCATCTACATCATCCGAGCATTTGGCCTG CAGCCCAAGGACCCCAATGGGAAGTGTGATCCTTACATCAAGATCTCCATAGGGAAGAAA TCGGTGAGCGACCAAGACAACTACATCCCCTGCACCCTGGAGCCTGTGTTTGGAAAGATG TTCGAGCTGACCTGCACTCTGCCTCTGGAGAAAGACCTGAAGATCACCCTCTATGACTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCCCCGGGAAGATCTCTACTGTCCCCCCATCGTGGTCAAGGTCATTGATAACCGGCAG TTTGGCCGCCGGCCTGTGGTGGGCCAGTGTACCATCCGCTCCCTGGAGAGCTTCCTGTGT GACCCTTACTCAGAGGAGAGTCCGTCCCCACAGGGCGGCCCAGATGACGTGAGCTTGCTC AGTCCTGGGGAAGACGTGCTGATTGACATCGACGACAAGGAACCCCTCATCCCCATCCAG GAGGAGGAGTTTATTGACTGGTGGAGCAAATTCTTCGCCTCGATTGGGGAGAGGGAAAAG TGTGGGTCCTACCTGGAGAAGGACTTTGACACTCTAAAGGTCTATGATACCCCGCTGGAG AATGTGAAGGCTTTTGAGGGCCTGTCTGTTTTTTGTAACACCTTCAAGCTCTACCGGGGC AAGACTCAGGAGGAGATGGAAGACCCATCTGTCATTGGGGAATTTAAGGGCCTCTTCAAA ATTTATCCCCTCCCAGAAGACCCTGCCATTCCCATGCCTCCAAGACAGTTCCACCAGCTG GCCTCCCAGGAGCCCCAGGAGTGCCTGGTCCGCATCTACATCATCCGAGCATTTGGCCTG CAGCCCAAGGACCCCAATGGGAAGTGTGATCCTTACATCAAGATCTCCATAGGGAAGAAA TCGGTGAGCGACCAAGACAACTACATCCCCTGCACCCTGGAGCCTGTGTTTGGAAAGATG TTCGAGCTGACCTGCACTCTGCCTCTGGAGAAAGACCTGAAGATCACCCTCTATGACTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-163, gnl|bosTau2|chr11 (10525202-10525364) | |
| 1-163, gnl|Hg17|chr2 (71751429-71751591) | |
| 1-163, gnl|Mm7|chr6 (84180290-84180452) | |
| 232-341, gnl|bosTau2|chr11 (10558651-10558760) | |
| 232-341, gnl|Hg17|chr2 (71782741-71782850) | |
| 232-341, gnl|Mm7|chr6 (84209296-84209405) | |
| 463-624, gnl|bosTau2|chr11 (10564968-10565129) | |
| 463-624, gnl|canFam2|chr17 (54113957-54113780) | |
| 463-624, gnl|danRer3|chr14 (17843968-17844141) | |
| 463-624, gnl|echTel1|scaffold_322914 (40526-40701) | |
| 463-624, gnl|fr1|chrUn (119186292-119186476) | |
| 463-624, gnl|galGal2|chrUn (76021736-76021544) | |
| 463-624, gnl|hg17|chr2 (71797647-71797831) | |
| 463-624, gnl|Hg17|chr2 (71797657-71797818) | |
| 463-624, gnl|loxAfr1|scaffold_23521 (412-228) | |
| 463-624, gnl|mm7|chr6 (84215970-84216155) | |
| 463-624, gnl|Mm7|chr6 (84215980-84216141) | |
| 463-624, gnl|monDom2|scaffold_157 (409170-408987) | |
| 463-624, gnl|oryCun1|scaffold_191325 (46998-47175) | |
| 463-624, gnl|panTro1|chr12 (74193547-74193715) | |
| 463-624, gnl|rheMac2|chr13 (71917786-71917970) | |
| 463-624, gnl|rn3|chr4 (118591227-118591412) | |
| 463-624, gnl|tetNig1|chrUn_random (13053029-13052852) | |
| 463-624, gnl|xenTro1|scaffold_194 (1229034-1228857) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-163, gnl|bosTau2|chr11 (10525202-10525364) | |
| 1-163, gnl|Hg17|chr2 (71751429-71751591) | |
| 1-163, gnl|Mm7|chr6 (84180290-84180452) | |
| 232-341, gnl|bosTau2|chr11 (10558651-10558760) | |
| 232-341, gnl|Hg17|chr2 (71782741-71782850) | |
| 232-341, gnl|Mm7|chr6 (84209296-84209405) | |
| 463-624, gnl|bosTau2|chr11 (10564968-10565129) | |
| 463-624, gnl|canFam2|chr17 (54113957-54113780) | |
| 463-624, gnl|danRer3|chr14 (17843968-17844141) | |
| 463-624, gnl|echTel1|scaffold_322914 (40526-40701) | |
| 463-624, gnl|fr1|chrUn (119186292-119186476) | |
| 463-624, gnl|galGal2|chrUn (76021736-76021544) | |
| 463-624, gnl|hg17|chr2 (71797647-71797831) | |
| 463-624, gnl|Hg17|chr2 (71797657-71797818) | |
| 463-624, gnl|loxAfr1|scaffold_23521 (412-228) | |
| 463-624, gnl|mm7|chr6 (84215970-84216155) | |
| 463-624, gnl|Mm7|chr6 (84215980-84216141) | |
| 463-624, gnl|monDom2|scaffold_157 (409170-408987) | |
| 463-624, gnl|oryCun1|scaffold_191325 (46998-47175) | |
| 463-624, gnl|panTro1|chr12 (74193547-74193715) | |
| 463-624, gnl|rheMac2|chr13 (71917786-71917970) | |
| 463-624, gnl|rn3|chr4 (118591227-118591412) | |
| 463-624, gnl|tetNig1|chrUn_random (13053029-13052852) | |
| 463-624, gnl|xenTro1|scaffold_194 (1229034-1228857) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |