Non-Coding RNA Search

Ss1.1-rpigcb_7439.5

Sequence:


               
               TCTTGAGATTTATATGTGGAAAAGACATCTTCTACTCCCGACTGTATTTTCAGAGAAGAG
ATTGCCATTTATGTGGTGCCAAGTGATAATGTCTCTCAAAGGCTTCCTGTGGACTGCCTT
TATCTTCCTAAACTCTAGACACCAGTTAACCTCAATAATTTTGGCCTTATTAGATGTTCT
TATGCATTATATTGAAAGCCAGGTTTACGTCACCTCACCCCAGTATTCCTTTTAGTGGAG
TAAATAAATTTACCGTACCAAGAAACCAGAATGAGGCAATTTGGTTGGTCTTTAAGTCAG
TAGGTTTGACTAGCTAGCTATCCTTACTGTCACATCTAACGCTAGGCATCAGAAACCACT
TGAGCCAGGAGTGTTGAATTGATAATTCCAGAGACATTTTCAACATACTTCAGACCTTTG
AAAAAAATTTTTTATGAATGTTTTACATTTGTGTGATTGCCTTAGATATTAAATTTACTT
AGTGCTAAAGATCATCCTTAGTTTTTTTAAATAGCAGTAGTTATAACTTATTTTATATAT
TGTCCCAAAGAAAGAAATTTATTTTAATGTTTTCAAAACAACTGCATCTGAATTTATGTG
CCTTAAGTTCTCTAGTGCTATTTCAACTTTTTTTTTCTTTTTTTTTTTTTTTTTTCGGTT
TAGATAAGTTTCGTATTTGTTTTCTACAGAGTAAATTTCCCTTCTTACATTTTTTAATGA
GAACTGACCATGTGGTTGCTTGGCAGAAAGAATGTTAAGAAAGGTTTTGGGAGCTCCCGT
CGTGGCGCAGTGGTTAACGAATCCGACTAGGAACCATGAGGTTGCGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTGAGATTTATATGTGGAAAAGACATCTTCTACTCCCGACTGTATTTTCAGAGAAGAG
ATTGCCATTTATGTGGTGCCAAGTGATAATGTCTCTCAAAGGCTTCCTGTGGACTGCCTT
TATCTTCCTAAACTCTAGACACCAGTTAACCTCAATAATTTTGGCCTTATTAGATGTTCT
TATGCATTATATTGAAAGCCAGGTTTACGTCACCTCACCCCAGTATTCCTTTTAGTGGAG
TAAATAAATTTACCGTACCAAGAAACCAGAATGAGGCAATTTGGTTGGTCTTTAAGTCAG
TAGGTTTGACTAGCTAGCTATCCTTACTGTCACATCTAACGCTAGGCATCAGAAACCACT
TGAGCCAGGAGTGTTGAATTGATAATTCCAGAGACATTTTCAACATACTTCAGACCTTTG
AAAAAAATTTTTTATGAATGTTTTACATTTGTGTGATTGCCTTAGATATTAAATTTACTT
AGTGCTAAAGATCATCCTTAGTTTTTTTAAATAGCAGTAGTTATAACTTATTTTATATAT
TGTCCCAAAGAAAGAAATTTATTTTAATGTTTTCAAAACAACTGCATCTGAATTTATGTG
CCTTAAGTTCTCTAGTGCTATTTCAACTTTTTTTTTCTTTTTTTTTTTTTTTTTTCGGTT
TAGATAAGTTTCGTATTTGTTTTCTACAGAGTAAATTTCCCTTCTTACATTTTTTAATGA
GAACTGACCATGTGGTTGCTTGGCAGAAAGAATGTTAAGAAAGGTTTTGGGAGCTCCCGT
CGTGGCGCAGTGGTTAACGAATCCGACTAGGAACCATGAGGTTGCGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-770, gnl|bosTau2|chr1 (51809721-51810489)
               

               
               1-770, gnl|Hg17|chr3 (184883373-184884432)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-770, gnl|bosTau2|chr1 (51809721-51810489)
               

               
               1-770, gnl|Hg17|chr3 (184883373-184884432)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mas (0.210305)
               

               
               jca (0.11396)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               jca (0.11396)
               

               
               cty (0.10408)

	1-770, gnl\|bosTau2\|chr1 (51809721-51810489)
	1-770, gnl\|Hg17\|chr3 (184883373-184884432)