Non-Coding RNA Search

Ss1.1-rpigcb_7565.5

Sequence:


               
               ATGAAGCCCGTGCAGTCCTTTTAACTGACGAAGATCAAGGCTTTATCTTCCTGTAAAGCT
GAAGCAGAATTGAGTCACCAACAAGAAAAAATCAAGTCCGATTACAACACAGGCAGAGCC
AGAGGGCTGAGACAGACCTCCTCGCGGGCCTTGCTGTCTTCCCCGCTTCCCTTGCTTCCC
AGAGCGTAAGCTTAAATCATCTCAGAAGGACAAGGTCTGCCAGTTCATGGCATTTACTCG
GGCTGGCAAGAGGACTGCCATCTGCTGCTTAGCACAGAACGAGTGGAGACTAGACGTGGC
CACAGGCAGCTTCTTCCAGAAGCCAGGCTTGTTTCACCAGGAATTCATGAGCAGCTCCGT
GGACAGGAGGAAGCTGGAGCAGCTGTATAACAGGTACAAAGATCCACAAGATGAAAATAA
AATTGGAATTGATGGGGTTCAACGGTTTTGTGATGACTTAAGCCTAGACCCTGCCAGTAT
CAGCGTTTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAAGCCCGTGCAGTCCTTTTAACTGACGAAGATCAAGGCTTTATCTTCCTGTAAAGCT
GAAGCAGAATTGAGTCACCAACAAGAAAAAATCAAGTCCGATTACAACACAGGCAGAGCC
AGAGGGCTGAGACAGACCTCCTCGCGGGCCTTGCTGTCTTCCCCGCTTCCCTTGCTTCCC
AGAGCGTAAGCTTAAATCATCTCAGAAGGACAAGGTCTGCCAGTTCATGGCATTTACTCG
GGCTGGCAAGAGGACTGCCATCTGCTGCTTAGCACAGAACGAGTGGAGACTAGACGTGGC
CACAGGCAGCTTCTTCCAGAAGCCAGGCTTGTTTCACCAGGAATTCATGAGCAGCTCCGT
GGACAGGAGGAAGCTGGAGCAGCTGTATAACAGGTACAAAGATCCACAAGATGAAAATAA
AATTGGAATTGATGGGGTTCAACGGTTTTGTGATGACTTAAGCCTAGACCCTGCCAGTAT
CAGCGTTTTGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JSA7_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JSA7_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-401, gnl|bosTau2|chr12 (48237409-48237804)
               

               
               3-401, gnl|Hg17|chr13 (113186513-113186156)
               

               
               3-401, gnl|Mm7|chr8 (13255696-13255129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-401, gnl|bosTau2|chr12 (48237409-48237804)
               

               
               3-401, gnl|Hg17|chr13 (113186513-113186156)
               

               
               3-401, gnl|Mm7|chr8 (13255696-13255129)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spl (0.143184)
               

               
               pty (0.142714)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               pty (0.142714)
               

               
               cty (0.10408)

	3-401, gnl\|bosTau2\|chr12 (48237409-48237804)
	3-401, gnl\|Hg17\|chr13 (113186513-113186156)
	3-401, gnl\|Mm7\|chr8 (13255696-13255129)