Non-Coding RNA Search

Ss1.1-rpigcb_7633.5

Sequence:


               
               GTCTGTCCATGCCGGCTCTGATACCGCCGCTCTCATGCTGCCTGTGTTCTAAGAGCGTTT
TCATTTTAAGAAAATAAGGTGTCTGGGTGGTTTCTCTTTTTGTTTTTTTTGTTTTTTTTT
TTTTTAAAGATTCTTTGAAGGGAGTACTGAAAAAAATACTTTCTTGAGTTTATCTCTCAA
ATCTTAGTGGTGGACCTGGGAGATGTCAGAAGCTTCCAGAAACGAAGTTTAAACAAGGCG
ACACAACTCAAGATTGGAATCGACACCTGTGACGTGAGGAGGATTTTTTTCAGTTTTAGC
TTCCAGCGGCTTCTCCCTGTGCATCAGGGCAGTGAGGGAGCGCGGTCCTCGGCCGGGCAG
GCAGCTCCGTGGTCTCCGCTGGACTCCGAGAAACAAAGCGCTTCCAGTGCGCCGTGGACT
CGGCCCCGCTCCCACCCCCACCCCCCCCCAGGAGGGGCCTCTGGCAGGACTTGGCCCTGA
GGCCGGAGGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTGTCCATGCCGGCTCTGATACCGCCGCTCTCATGCTGCCTGTGTTCTAAGAGCGTTT
TCATTTTAAGAAAATAAGGTGTCTGGGTGGTTTCTCTTTTTGTTTTTTTTGTTTTTTTTT
TTTTTAAAGATTCTTTGAAGGGAGTACTGAAAAAAATACTTTCTTGAGTTTATCTCTCAA
ATCTTAGTGGTGGACCTGGGAGATGTCAGAAGCTTCCAGAAACGAAGTTTAAACAAGGCG
ACACAACTCAAGATTGGAATCGACACCTGTGACGTGAGGAGGATTTTTTTCAGTTTTAGC
TTCCAGCGGCTTCTCCCTGTGCATCAGGGCAGTGAGGGAGCGCGGTCCTCGGCCGGGCAG
GCAGCTCCGTGGTCTCCGCTGGACTCCGAGAAACAAAGCGCTTCCAGTGCGCCGTGGACT
CGGCCCCGCTCCCACCCCCACCCCCCCCCAGGAGGGGCCTCTGGCAGGACTTGGCCCTGA
GGCCGGAGGGCG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-427, gnl|bosTau2|chr7 (2313444-2313852)
               

               
               2-427, gnl|Hg17|chr19 (18838784-18839220)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-427, gnl|bosTau2|chr7 (2313444-2313852)
               

               
               2-427, gnl|Hg17|chr19 (18838784-18839220)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nco (0.161734)
               

               
               ebs (0.118301)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               ebs (0.118301)
               

               
               cty (0.10408)

	2-427, gnl\|bosTau2\|chr7 (2313444-2313852)
	2-427, gnl\|Hg17\|chr19 (18838784-18839220)