Non-Coding RNA Search

Ss1.1-rpigcb_8196.5

Sequence:


               
               CCCTCTCTGCATGTAGCACACCTGTGTCTGTGACACAAGAATGTAGCAGCCGTGCACTTC
TCTTCTGTTGCCAGAAACTTGCAATCCAGGTGTGAAATGAATCTTCCAAAGGTTATGTTA
AATTGTGTTTAGCCTGGCAAATTAAACTCTTCTATTAAATTTTAAAACATTTAAGCAGAT
TAAACACTGGAAAAGCAAAGGCTGTATTTGATTCAGCATGAAATGCACTGTCTGCAGACG
CATCTCCCATCTCCAGTGTCTGTGTTAGATGGTGACAGTAGTTAGAGTTTTTGTTTTTAC
TTCTCCTGAACTTTCAAATACTGATTTTTATTTTCTTGTAAAATTTGTCTTCATTTTTGA
TTGCAGATTAAAGAATGCTATAAAGCATGAATTAGTTTTAGGAAGCTGACACTTGATTTT
GTTTGGAAAATATTAACTTGCTCGTTGTAGAGTTAAAACTGTATGTAAAATGCTAGAAGT
GCCTCTTTTCTCACCCAGGGTTTTGTTTTTCCATGTGAGATTGTGATTGCCATTGGACCC
TGAAAAGCTGTGTTACAGCAGGTTGGGGGCACCAGTGAGGCATCTCTCTTCTGTTTCCAG
ACTTGCTTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTCTCTGCATGTAGCACACCTGTGTCTGTGACACAAGAATGTAGCAGCCGTGCACTTC
TCTTCTGTTGCCAGAAACTTGCAATCCAGGTGTGAAATGAATCTTCCAAAGGTTATGTTA
AATTGTGTTTAGCCTGGCAAATTAAACTCTTCTATTAAATTTTAAAACATTTAAGCAGAT
TAAACACTGGAAAAGCAAAGGCTGTATTTGATTCAGCATGAAATGCACTGTCTGCAGACG
CATCTCCCATCTCCAGTGTCTGTGTTAGATGGTGACAGTAGTTAGAGTTTTTGTTTTTAC
TTCTCCTGAACTTTCAAATACTGATTTTTATTTTCTTGTAAAATTTGTCTTCATTTTTGA
TTGCAGATTAAAGAATGCTATAAAGCATGAATTAGTTTTAGGAAGCTGACACTTGATTTT
GTTTGGAAAATATTAACTTGCTCGTTGTAGAGTTAAAACTGTATGTAAAATGCTAGAAGT
GCCTCTTTTCTCACCCAGGGTTTTGTTTTTCCATGTGAGATTGTGATTGCCATTGGACCC
TGAAAAGCTGTGTTACAGCAGGTTGGGGGCACCAGTGAGGCATCTCTCTTCTGTTTCCAG
ACTTGCTTTTTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-608, gnl|bosTau2|chr1 (100105718-100106297)
               

               
               4-608, gnl|Hg17|chr8 (432030-431419)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-608, gnl|bosTau2|chr1 (100105718-100106297)
               

               
               4-608, gnl|Hg17|chr8 (432030-431419)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sag (0.182715)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               cty (0.10408)

	4-608, gnl\|bosTau2\|chr1 (100105718-100106297)
	4-608, gnl\|Hg17\|chr8 (432030-431419)