Ss1.1-rpigcb_8636.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATAACCCTGACCACCACCTCTTCGTGGGGCACCTGATCCACAACGTGGTGCCCCATCCGC TTTCCTTGGAGCAAGTACTATGTGCCGAAGGTGGTGATGGAGGACGAACACTACCCGCCC TACTGTGGGGGGGGTGGCTTCCTGCTGTCCCGCTTCACAGCCACCGCCCTGCGTCGTGCC GCCCGCACCCTGGACCTCTTCCCCATTGATGATGTCTTCATGGGCATGTGCCTGAAACGA GAGGGCCTGGAGCCCGCCTCACACAGTGGTGTCCGCACAGCTGGTGTTCAGGTCCCATCC AGCCGCCTGTCCTCCTTCGACCCTTGCTACTACCGAGAGCTGCTGCTGGTGCACCGCTTC TTGCCCTATGAGATGCTGCTCATGTGGGATGCGCTGAGCCAGCCCAACCTCAGCTGTGGC AAGCGAACACAGATCTACTGAGGTGGTGTCTAGGAGCCCAGCCTCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATAACCCTGACCACCACCTCTTCGTGGGGCACCTGATCCACAACGTGGTGCCCCATCCGC TTTCCTTGGAGCAAGTACTATGTGCCGAAGGTGGTGATGGAGGACGAACACTACCCGCCC TACTGTGGGGGGGGTGGCTTCCTGCTGTCCCGCTTCACAGCCACCGCCCTGCGTCGTGCC GCCCGCACCCTGGACCTCTTCCCCATTGATGATGTCTTCATGGGCATGTGCCTGAAACGA GAGGGCCTGGAGCCCGCCTCACACAGTGGTGTCCGCACAGCTGGTGTTCAGGTCCCATCC AGCCGCCTGTCCTCCTTCGACCCTTGCTACTACCGAGAGCTGCTGCTGGTGCACCGCTTC TTGCCCTATGAGATGCTGCTCATGTGGGATGCGCTGAGCCAGCCCAACCTCAGCTGTGGC AAGCGAACACAGATCTACTGAGGTGGTGTCTAGGAGCCCAGCCTCAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 344-463, - strand, RNAz p=0.561743 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 344-463, - strand, RNAz p=0.561743 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-464, gnl|bosTau2|chr7 (4599973-4599513) | |
| 3-464, gnl|canFam2|chr20 (48078552-48078039) | |
| 3-464, gnl|danRer3|chrNA (98523253-98522731) | |
| 3-464, gnl|dasNov1|scaffold_62036 (5595-5091) | |
| 3-464, gnl|echTel1|scaffold_26984 (10-525) | |
| 3-464, gnl|fr1|chrUn (126426565-126427087) | |
| 3-464, gnl|galGal2|chr9 (14632848-14633351) | |
| 3-464, gnl|hg17|chr19 (17783377-17783890) | |
| 3-464, gnl|Hg17|chr19 (17783494-17783954) | |
| 3-464, gnl|loxAfr1|scaffold_186063 (1521-1008) | |
| 3-464, gnl|mm7|chr8 (70160704-70160191) | |
| 3-464, gnl|Mm7|chr8 (70160585-70160118) | |
| 3-464, gnl|monDom2|scaffold_209 (553185-553692) | |
| 3-464, gnl|oryCun1|scaffold_190068 (12223-12715) | |
| 3-464, gnl|panTro1|chr20 (18775971-18776484) | |
| 3-464, gnl|rheMac2|chr19 (17375870-17376383) | |
| 3-464, gnl|rn3|chr16 (18893832-18893319) | |
| 3-464, gnl|tetNig1|chr1 (14562165-14561643) | |
| 3-464, gnl|xenTro1|scaffold_1217 (175454-175970) | |
| 6-443, gnl|bosTau2|chr15 (35492063-35492499) | |
| 6-443, gnl|Hg17|chr11 (76428964-76429403) | |
| 6-443, gnl|Mm7|chr7 (94225948-94225507) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-464, gnl|bosTau2|chr7 (4599973-4599513) | |
| 3-464, gnl|canFam2|chr20 (48078552-48078039) | |
| 3-464, gnl|danRer3|chrNA (98523253-98522731) | |
| 3-464, gnl|dasNov1|scaffold_62036 (5595-5091) | |
| 3-464, gnl|echTel1|scaffold_26984 (10-525) | |
| 3-464, gnl|fr1|chrUn (126426565-126427087) | |
| 3-464, gnl|galGal2|chr9 (14632848-14633351) | |
| 3-464, gnl|hg17|chr19 (17783377-17783890) | |
| 3-464, gnl|Hg17|chr19 (17783494-17783954) | |
| 3-464, gnl|loxAfr1|scaffold_186063 (1521-1008) | |
| 3-464, gnl|mm7|chr8 (70160704-70160191) | |
| 3-464, gnl|Mm7|chr8 (70160585-70160118) | |
| 3-464, gnl|monDom2|scaffold_209 (553185-553692) | |
| 3-464, gnl|oryCun1|scaffold_190068 (12223-12715) | |
| 3-464, gnl|panTro1|chr20 (18775971-18776484) | |
| 3-464, gnl|rheMac2|chr19 (17375870-17376383) | |
| 3-464, gnl|rn3|chr16 (18893832-18893319) | |
| 3-464, gnl|tetNig1|chr1 (14562165-14561643) | |
| 3-464, gnl|xenTro1|scaffold_1217 (175454-175970) | |
| 6-443, gnl|bosTau2|chr15 (35492063-35492499) | |
| 6-443, gnl|Hg17|chr11 (76428964-76429403) | |
| 6-443, gnl|Mm7|chr7 (94225948-94225507) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |