Non-Coding RNA Search

Ss1.1-rpigcb_9344.5

Sequence:


               
               CTGCACCCCAAACCAAAGAGTTTTGGGAATATTGAAAAGAGAGCAAAGATATATTGTGCT
AGGCCAGACTGCAGCCATGACTGGGGAATCTATGTGAGGTATAAGGCATTTGAGATGCCA
TTTATAAAAATCGAAAGTTTTGTGGTGGAGGATATTGCAACTGGAGTTCAGACCGTGCAT
GCCAAGTGGAAGGACTTTAATTTTGAGAAGCTATCATTTGATGCTGCAGAAATGGCCGGT
GGAGCTCAGGACCTGGGTCTTCAGGGAATGGGCAACCTTGAGTGAAGGAGAAATTGGACT
GGGGCTAAATCATGGATCGCCTGTACCACTGTTAAGATAGTTTACCTAAGGCTTGTACCA
TACTGAGTGTTTGTCACTTCATTCTGTTGTTTTCTGCAGTTTCTGTTAATGTTGTTTATG
TAAAGCACAAGTGACTGAATCATGACACTAAATGCATTGTAGGCCAGCAGAACTTGGAAA
ATTAAAAAGCCTCTTAACTTGTTGCTTCAGAACCCACTGCCAGTGTATACCCATAGCCAC
TCAGTGTATGTTGGGAGAAATGGATGAGTGGAATGTTGGAAGGTTTTCCATGCCTCCCTT
TCTTTCTTCAGCTTAAAACCATAAACTGGCTTGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCACCCCAAACCAAAGAGTTTTGGGAATATTGAAAAGAGAGCAAAGATATATTGTGCT
AGGCCAGACTGCAGCCATGACTGGGGAATCTATGTGAGGTATAAGGCATTTGAGATGCCA
TTTATAAAAATCGAAAGTTTTGTGGTGGAGGATATTGCAACTGGAGTTCAGACCGTGCAT
GCCAAGTGGAAGGACTTTAATTTTGAGAAGCTATCATTTGATGCTGCAGAAATGGCCGGT
GGAGCTCAGGACCTGGGTCTTCAGGGAATGGGCAACCTTGAGTGAAGGAGAAATTGGACT
GGGGCTAAATCATGGATCGCCTGTACCACTGTTAAGATAGTTTACCTAAGGCTTGTACCA
TACTGAGTGTTTGTCACTTCATTCTGTTGTTTTCTGCAGTTTCTGTTAATGTTGTTTATG
TAAAGCACAAGTGACTGAATCATGACACTAAATGCATTGTAGGCCAGCAGAACTTGGAAA
ATTAAAAAGCCTCTTAACTTGTTGCTTCAGAACCCACTGCCAGTGTATACCCATAGCCAC
TCAGTGTATGTTGGGAGAAATGGATGAGTGGAATGTTGGAAGGTTTTCCATGCCTCCCTT
TCTTTCTTCAGCTTAAAACCATAAACTGGCTTGTGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-605, gnl|bosTau2|chr8 (6276048-6276660)
               

               
               4-605, gnl|Hg17|chr9 (32447359-32446771)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-605, gnl|bosTau2|chr8 (6276048-6276660)
               

               
               4-605, gnl|Hg17|chr9 (32447359-32446771)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.33184)
               

               
               cty (0.20816)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.33184)
               

               
               cty (0.20816)

	4-605, gnl\|bosTau2\|chr8 (6276048-6276660)
	4-605, gnl\|Hg17\|chr9 (32447359-32446771)