Non-Coding RNA Search

Ss1.1-rpigcb_9573.5

Sequence:


               
               GCGGGTGGGTGTCGTGGTCCCAGCTCTCGAGCTTAGGGAAAAGCGTGTTGTGCTCTTGGC
CAGCATGTTTCCGGCTCTCGGCTGTGTGGATGAGGAAGAGGAGCAAGCGGAGGAGGATTG
CCCAGAACTGGTCCCCATTGAGACGAAGCAAAGAGAGGAGGAGGAGGAAAAGTTTGACCC
CGGCGCTAGGATCCCAGTCACAATTATCACCGGGTATTTAGGTGCTGGAAAAACAACACT
TCTGAACTATATTTTGACAGAGCAACATAGTAAAAGAATAGCTGTGATTTTAAATGAATT
CGGGGAGGGAAGTGCATTGGAGAAATCCTTAGCTGTCAGCCAAGGTGGAGAACTCTATGA
AGAATGGCTGGAACTTAGAAATGGTTGCCTCTGCTGTTCTGTAAAGGACAATGGCCTTAG
AGCTATTGAGAATTTGATGCAGAAGAAGGGGAAATTTGATTACATACTGTTAGAGACCAC
TGGATTAGCAGATCCTGGTGCAGTAGCTTCTATGTTTTGGGTTGATGCTGCATTAGGGGT
TGATATTTATCTTGATGGTATTATAACTGTTGTGGATTCAAAATATGGATTAAAACATTT
AGCAGAAGAAAAACCCGATGGCCTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGA
TATCATCATCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGTGGGTGTCGTGGTCCCAGCTCTCGAGCTTAGGGAAAAGCGTGTTGTGCTCTTGGC
CAGCATGTTTCCGGCTCTCGGCTGTGTGGATGAGGAAGAGGAGCAAGCGGAGGAGGATTG
CCCAGAACTGGTCCCCATTGAGACGAAGCAAAGAGAGGAGGAGGAGGAAAAGTTTGACCC
CGGCGCTAGGATCCCAGTCACAATTATCACCGGGTATTTAGGTGCTGGAAAAACAACACT
TCTGAACTATATTTTGACAGAGCAACATAGTAAAAGAATAGCTGTGATTTTAAATGAATT
CGGGGAGGGAAGTGCATTGGAGAAATCCTTAGCTGTCAGCCAAGGTGGAGAACTCTATGA
AGAATGGCTGGAACTTAGAAATGGTTGCCTCTGCTGTTCTGTAAAGGACAATGGCCTTAG
AGCTATTGAGAATTTGATGCAGAAGAAGGGGAAATTTGATTACATACTGTTAGAGACCAC
TGGATTAGCAGATCCTGGTGCAGTAGCTTCTATGTTTTGGGTTGATGCTGCATTAGGGGT
TGATATTTATCTTGATGGTATTATAACTGTTGTGGATTCAAAATATGGATTAAAACATTT
AGCAGAAGAAAAACCCGATGGCCTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGA
TATCATCATCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JTY6_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JTY6_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-223, gnl|bosTau2|chr8 (21766532-21766306)
               

               
               5-223, gnl|Hg17|chr9 (169021-168814)
               

               
               5-223, gnl|Mm7|chr19 (24661565-24661371)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-223, gnl|bosTau2|chr8 (21766532-21766306)
               

               
               5-223, gnl|Hg17|chr9 (169021-168814)
               

               
               5-223, gnl|Mm7|chr19 (24661565-24661371)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nlu (0.191681)
               

               
               cty (0.10408)
               

               
               ldo (0.0970026)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               cty (0.10408)
               

               
               ldo (0.0970026)

	5-223, gnl\|bosTau2\|chr8 (21766532-21766306)
	5-223, gnl\|Hg17\|chr9 (169021-168814)
	5-223, gnl\|Mm7\|chr19 (24661565-24661371)