Non-Coding RNA Search

Ss1.1-rpigcb_9637.5

Sequence:


               
               CACAGGATACAGAGATGGGTAGGAGGAGATGAAAATATAAGCTTCTTATTCTTCCTTTTA
AAATAATAGGCCAACTGAAGTATTTACAGGGTGGCCCAAGCAGAACAAGAAGAACTCACT
GTGGTTTTAAGACAAGCTGTCTAAACAGAAACTTTCCCTCAAGAGGTGGGCTGGGGCCGG
AAGAATCTCCCCGTGTCCAAGACAGTGGCTTAAGGAGAAGTCCCCACGCATGCTGCTGCG
GGGGGCCTCGCATGTCTTTATTAGCAAAAGGACCTTTTTGCCCTGGGCCTGAGAATTTAG
AATGAGAAGGTTCCTGGAGTTTTCAGGCTGTAATTCATACAACACCATGACAGGTAACAT
AATTTTTCAAGCCCCTTTTTTTGCCCTCCTTCTATTTTTTTGTTCCTTTTCCACAGCAGG
GCTTCTTTTCAGTCCAGACTTTTAGTCTGACTGCACCTAACTTATGCCTTCCTTATTTAG
CCTGATCCCTAGTCTTTTTTTTTTTTTTTTTCCTCTTTTTCAAAGTTTTCTCTCTCCTGG
GTTAAAAAAAAAAGAAAAAAAGTAAAGGGAAGTAGATTCTAAGTTAGCTAAAAGACATGC
ATTAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAGGATACAGAGATGGGTAGGAGGAGATGAAAATATAAGCTTCTTATTCTTCCTTTTA
AAATAATAGGCCAACTGAAGTATTTACAGGGTGGCCCAAGCAGAACAAGAAGAACTCACT
GTGGTTTTAAGACAAGCTGTCTAAACAGAAACTTTCCCTCAAGAGGTGGGCTGGGGCCGG
AAGAATCTCCCCGTGTCCAAGACAGTGGCTTAAGGAGAAGTCCCCACGCATGCTGCTGCG
GGGGGCCTCGCATGTCTTTATTAGCAAAAGGACCTTTTTGCCCTGGGCCTGAGAATTTAG
AATGAGAAGGTTCCTGGAGTTTTCAGGCTGTAATTCATACAACACCATGACAGGTAACAT
AATTTTTCAAGCCCCTTTTTTTGCCCTCCTTCTATTTTTTTGTTCCTTTTCCACAGCAGG
GCTTCTTTTCAGTCCAGACTTTTAGTCTGACTGCACCTAACTTATGCCTTCCTTATTTAG
CCTGATCCCTAGTCTTTTTTTTTTTTTTTTTCCTCTTTTTCAAAGTTTTCTCTCTCCTGG
GTTAAAAAAAAAAGAAAAAAAGTAAAGGGAAGTAGATTCTAAGTTAGCTAAAAGACATGC
ATTAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-612, gnl|bosTau2|chr8 (37246962-37247561)
               

               
               1-612, gnl|Hg17|chr8 (23594128-23593496)
               

               
               1-612, gnl|Mm7|chr14 (64055346-64055944)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr8 (37246962-37247561)
               

               
               1-612, gnl|Hg17|chr8 (23594128-23593496)
               

               
               1-612, gnl|Mm7|chr14 (64055346-64055944)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               bla (0.124347)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)
               

               
               cty (0.10408)

	1-612, gnl\|bosTau2\|chr8 (37246962-37247561)
	1-612, gnl\|Hg17\|chr8 (23594128-23593496)
	1-612, gnl\|Mm7\|chr14 (64055346-64055944)