Non-Coding RNA Search

Ss1.1-rpigcf0_001366.5

Sequence:


               
               AATGCATTATAAGGCAGGGATTCCCAAACAATTAAATAGCTTGTTAAAAATATAGGTCNT
CAGGCTCCATCTCAAGGTACTGAATCAGAATCTCCAGGGTAGAGAAGTTCGTACACATCA
ATTTTAAAGCTCCTCTGATAAGGCAGATGTGCGGACAAATTTGGGAACTACTCTGTAAGG
CAGGGATCAGGTAACTTGTTCTGTAAAAGGTCAGAGAGTAAAACTTTTAGGCTGTGCAGG
TCAAGAGGCAAAACTGAGAATATTATACAGCTATTTACATAACAAATCTTTTTTCCAACA
AATTCTACAAAATTTTTGACAAAATTCCAAATGTAAAAATAAACACAATTTTTTTTTTTT
TGCAATACTGGTCTACTAACAAGAAGAATAAAATTCTTTCTTGAGAGGGGTAAGATTTCA
CTTAATTGGGGTTCAAAGTCAGTGTTTCCTATCATCAGATCAATTGCAAATGGTCACTGG
TAAAAACTTCCTGAGCTGGAAAGGACTTACAAAACCAACAGGCCGTGGGCTGTATTTGAC
CCAACGGCTGCAGCTTGCCAACCTCTGCAGAAAGCTGTAAAGAAGAAGAAAGAGCCACAG
GCCCTGTCCTTAAGCAACTGACAAGTTAGTTTAAAAGACAGGAACGGCAAAGGTAAAAAC
AACAGTGAAAAACATTTAGTGGAATTCCCGATGTTTTCTGTCGTGGAGCAGTGAGTCCTA
ACTGTTTCAAAGATGAACAGTCTTTTTTAATGTCAAAAAAATGTGGCAGACGTCTATGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGCATTATAAGGCAGGGATTCCCAAACAATTAAATAGCTTGTTAAAAATATAGGTCNT
CAGGCTCCATCTCAAGGTACTGAATCAGAATCTCCAGGGTAGAGAAGTTCGTACACATCA
ATTTTAAAGCTCCTCTGATAAGGCAGATGTGCGGACAAATTTGGGAACTACTCTGTAAGG
CAGGGATCAGGTAACTTGTTCTGTAAAAGGTCAGAGAGTAAAACTTTTAGGCTGTGCAGG
TCAAGAGGCAAAACTGAGAATATTATACAGCTATTTACATAACAAATCTTTTTTCCAACA
AATTCTACAAAATTTTTGACAAAATTCCAAATGTAAAAATAAACACAATTTTTTTTTTTT
TGCAATACTGGTCTACTAACAAGAAGAATAAAATTCTTTCTTGAGAGGGGTAAGATTTCA
CTTAATTGGGGTTCAAAGTCAGTGTTTCCTATCATCAGATCAATTGCAAATGGTCACTGG
TAAAAACTTCCTGAGCTGGAAAGGACTTACAAAACCAACAGGCCGTGGGCTGTATTTGAC
CCAACGGCTGCAGCTTGCCAACCTCTGCAGAAAGCTGTAAAGAAGAAGAAAGAGCCACAG
GCCCTGTCCTTAAGCAACTGACAAGTTAGTTTAAAAGACAGGAACGGCAAAGGTAAAAAC
AACAGTGAAAAACATTTAGTGGAATTCCCGATGTTTTCTGTCGTGGAGCAGTGAGTCCTA
ACTGTTTCAAAGATGAACAGTCTTTTTTAATGTCAAAAAAATGTGGCAGACGTCTATGAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-730, gnl|bosTau2|chr16 (53671816-53671117)
               

               
               4-730, gnl|Hg17|chr1 (208374977-208375711)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-730, gnl|bosTau2|chr16 (53671816-53671117)
               

               
               4-730, gnl|Hg17|chr1 (208374977-208375711)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	4-730, gnl\|bosTau2\|chr16 (53671816-53671117)
	4-730, gnl\|Hg17\|chr1 (208374977-208375711)