Non-Coding RNA Search

Ss1.1-rpigcf0_006804.5

Sequence:


               
               GCAGCAAAAGTCTGTTTTATATAAATCCTCTCCTGTGTGCTGCTGTCTTCTGGTCAGTGG
TTGCTTTTGAGTAATTCATTTATATTTTAAAGCCAGATATTTCTTTCCTCTTCTTAAAAT
ATTATATGAAAATAAATACTTGATAAATTAAAAGCAAGTTTATTGTGAAAAATATTTAGG
AGGAAATTTTAAAAACATGATTTTACTTGAAGGAGATAATTGAAAGTGTGAAAAGGAGAG
GAAATTTCTTGAATGCTATGGTTTTCTTTGTCTCTCTTATCGAATTTAATTAAAACCAGA
ATAAAACGTGTTTCTCTTTCACTTATTTTATGTTCCTTTCATTATAATATGTAATCACTG
AAAAAAAATTATTCAATTTTACATAAAGGATTAACATGCTTCTACTATAAACTGTGGACT
TTTAAGAGAGTAATACAATTTTTAATAAAATTTTCACACTAAAAATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCAAAAGTCTGTTTTATATAAATCCTCTCCTGTGTGCTGCTGTCTTCTGGTCAGTGG
TTGCTTTTGAGTAATTCATTTATATTTTAAAGCCAGATATTTCTTTCCTCTTCTTAAAAT
ATTATATGAAAATAAATACTTGATAAATTAAAAGCAAGTTTATTGTGAAAAATATTTAGG
AGGAAATTTTAAAAACATGATTTTACTTGAAGGAGATAATTGAAAGTGTGAAAAGGAGAG
GAAATTTCTTGAATGCTATGGTTTTCTTTGTCTCTCTTATCGAATTTAATTAAAACCAGA
ATAAAACGTGTTTCTCTTTCACTTATTTTATGTTCCTTTCATTATAATATGTAATCACTG
AAAAAAAATTATTCAATTTTACATAAAGGATTAACATGCTTCTACTATAAACTGTGGACT
TTTAAGAGAGTAATACAATTTTTAATAAAATTTTCACACTAAAAATGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-464, gnl|bosTau2|chr25 (36298033-36297589)
               

               
               1-464, gnl|Hg17|chr5 (51892158-51891705)
               

               
               1-464, gnl|Mm7|chr13 (112459786-112460280)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-464, gnl|bosTau2|chr25 (36298033-36297589)
               

               
               1-464, gnl|Hg17|chr5 (51892158-51891705)
               

               
               1-464, gnl|Mm7|chr13 (112459786-112460280)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.612276)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.612276)

	1-464, gnl\|bosTau2\|chr25 (36298033-36297589)
	1-464, gnl\|Hg17\|chr5 (51892158-51891705)
	1-464, gnl\|Mm7\|chr13 (112459786-112460280)