Ss1.1-rpigcf0_006869.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTCGTGACAAAAGAAGTCAAGAGGCAGGATGTCTGCACTTTCTATTTATGGAACACAAA GTTTAAACAGAGCCCTCCATCCAGAATTCATCTGGCTATTAAAATTGCTTTCCGAGTTAC TATCTGCAAGGAAGCCAACAGCATTTAAATATTTCTCTGTAGTGAGTTTGTCTTTAGAGA TGTTTTACCTGGGTTTATTATCTGCAGGGAAGCCAACAGCATTTAAATATTTCTCTTTAG TGAGTTTGTCTTTAGAGATGTTTTACCTGGGTTTATTATCTGCAGGGAAGCCAACAGCAT TTAAATATTTCTTTGTAGTGCGTTTGTCTTTAGGGATGTTTTACATGGGTTTAATTCACT GATCAATTTTACCTTGTCAAAACAGAGCATGGTCTGTCAAAAACAGGATGAAGCTCATTA GTAAGACACAGGAGATAGTACAATAGAGGGGAGAATAAACAGACTACTCTGAAACAAGGA AATGAGAACCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTCGTGACAAAAGAAGTCAAGAGGCAGGATGTCTGCACTTTCTATTTATGGAACACAAA GTTTAAACAGAGCCCTCCATCCAGAATTCATCTGGCTATTAAAATTGCTTTCCGAGTTAC TATCTGCAAGGAAGCCAACAGCATTTAAATATTTCTCTGTAGTGAGTTTGTCTTTAGAGA TGTTTTACCTGGGTTTATTATCTGCAGGGAAGCCAACAGCATTTAAATATTTCTCTTTAG TGAGTTTGTCTTTAGAGATGTTTTACCTGGGTTTATTATCTGCAGGGAAGCCAACAGCAT TTAAATATTTCTTTGTAGTGCGTTTGTCTTTAGGGATGTTTTACATGGGTTTAATTCACT GATCAATTTTACCTTGTCAAAACAGAGCATGGTCTGTCAAAAACAGGATGAAGCTCATTA GTAAGACACAGGAGATAGTACAATAGAGGGGAGAATAAACAGACTACTCTGAAACAAGGA AATGAGAACCTA |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 6-197, gnl|bosTau2|chr20 (12262193-12262388) | |
| 6-197, gnl|canFam2|chr2 (46489907-46490679) | |
| 6-197, gnl|dasNov1|scaffold_17258 (6651-5855) | |
| 6-197, gnl|echTel1|scaffold_180766 (940-1720) | |
| 6-197, gnl|hg17|chr5 (55828249-55829043) | |
| 6-197, gnl|Hg17|chr5 (55828686-55828486) | |
| 6-197, gnl|loxAfr1|scaffold_19808 (60114-59340) | |
| 6-197, gnl|mm7|chr13 (109242869-109242143) | |
| 6-197, gnl|Mm7|chr13 (109242427-109242626) | |
| 6-197, gnl|oryCun1|scaffold_204423 (53621-52863) | |
| 6-197, gnl|panTro1|chr4 (60349563-60348771) | |
| 6-197, gnl|rheMac2|chr6 (54157886-54158679) | |
| 6-197, gnl|rn3|chr2 (43319302-43318573) | |
| 275-492, gnl|bosTau2|chr20 (12262310-12262527) | |
| 275-492, gnl|canFam2|chr2 (46489907-46490679) | |
| 275-492, gnl|dasNov1|scaffold_17258 (6651-5855) | |
| 275-492, gnl|echTel1|scaffold_180766 (940-1720) | |
| 275-492, gnl|hg17|chr5 (55828249-55829043) | |
| 275-492, gnl|Hg17|chr5 (55828564-55828348) | |
| 275-492, gnl|loxAfr1|scaffold_19808 (60114-59340) | |
| 275-492, gnl|mm7|chr13 (109242869-109242143) | |
| 275-492, gnl|Mm7|chr13 (109242546-109242768) | |
| 275-492, gnl|oryCun1|scaffold_204423 (53621-52863) | |
| 275-492, gnl|panTro1|chr4 (60349563-60348771) | |
| 275-492, gnl|rheMac2|chr6 (54157886-54158679) | |
| 275-492, gnl|rn3|chr2 (43319302-43318573) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-197, gnl|bosTau2|chr20 (12262193-12262388) | |
| 6-197, gnl|canFam2|chr2 (46489907-46490679) | |
| 6-197, gnl|dasNov1|scaffold_17258 (6651-5855) | |
| 6-197, gnl|echTel1|scaffold_180766 (940-1720) | |
| 6-197, gnl|hg17|chr5 (55828249-55829043) | |
| 6-197, gnl|Hg17|chr5 (55828686-55828486) | |
| 6-197, gnl|loxAfr1|scaffold_19808 (60114-59340) | |
| 6-197, gnl|mm7|chr13 (109242869-109242143) | |
| 6-197, gnl|Mm7|chr13 (109242427-109242626) | |
| 6-197, gnl|oryCun1|scaffold_204423 (53621-52863) | |
| 6-197, gnl|panTro1|chr4 (60349563-60348771) | |
| 6-197, gnl|rheMac2|chr6 (54157886-54158679) | |
| 6-197, gnl|rn3|chr2 (43319302-43318573) | |
| 275-492, gnl|bosTau2|chr20 (12262310-12262527) | |
| 275-492, gnl|canFam2|chr2 (46489907-46490679) | |
| 275-492, gnl|dasNov1|scaffold_17258 (6651-5855) | |
| 275-492, gnl|echTel1|scaffold_180766 (940-1720) | |
| 275-492, gnl|hg17|chr5 (55828249-55829043) | |
| 275-492, gnl|Hg17|chr5 (55828564-55828348) | |
| 275-492, gnl|loxAfr1|scaffold_19808 (60114-59340) | |
| 275-492, gnl|mm7|chr13 (109242869-109242143) | |
| 275-492, gnl|Mm7|chr13 (109242546-109242768) | |
| 275-492, gnl|oryCun1|scaffold_204423 (53621-52863) | |
| 275-492, gnl|panTro1|chr4 (60349563-60348771) | |
| 275-492, gnl|rheMac2|chr6 (54157886-54158679) | |
| 275-492, gnl|rn3|chr2 (43319302-43318573) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ctl (0.765345) |