Non-Coding RNA Search

Ss1.1-rpigcf0_007753.5

Sequence:


               
               AATTCGATTCGCTTGCTGGGTTTCTCATCAGAAATATCCCTGTCATCAGTGATAACATAC
AGATCAAGCACAAGTGGTCTTCGTGCTTTGAGAAGCATTGCCCTCTCTGTCATATTAGTC
CGCGCTGGCCTTGGGCTTGATTCAAATGTACAAAGTAACACATTTCTCATTGTCAACTAA
GAATTTTGTTCCTTCACTATTGCCAGTATTTCCAATCACTGAGCTTTGGGAAATGGAGGT
GAACACTGTGCATTACTTTCTCAAGAAGAGAAGAGAACCTATTTCATGCAGGATGCTCCC
CAGATGTTCCCATGCTCTTTCTTGGAGAAAGGCGGGGTTACTGCGTGGGCACAGCACCAA
GCACAGGGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCGATTCGCTTGCTGGGTTTCTCATCAGAAATATCCCTGTCATCAGTGATAACATAC
AGATCAAGCACAAGTGGTCTTCGTGCTTTGAGAAGCATTGCCCTCTCTGTCATATTAGTC
CGCGCTGGCCTTGGGCTTGATTCAAATGTACAAAGTAACACATTTCTCATTGTCAACTAA
GAATTTTGTTCCTTCACTATTGCCAGTATTTCCAATCACTGAGCTTTGGGAAATGGAGGT
GAACACTGTGCATTACTTTCTCAAGAAGAGAAGAGAACCTATTTCATGCAGGATGCTCCC
CAGATGTTCCCATGCTCTTTCTTGGAGAAAGGCGGGGTTACTGCGTGGGCACAGCACCAA
GCACAGGGCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-372, gnl|bosTau2|chr6 (8404059-8404411)
               

               
               11-372, gnl|Hg17|chr4 (104329136-104328424)
               

               
               11-372, gnl|Mm7|chr3 (135117980-135118304)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-372, gnl|bosTau2|chr6 (8404059-8404411)
               

               
               11-372, gnl|Hg17|chr4 (104329136-104328424)
               

               
               11-372, gnl|Mm7|chr3 (135117980-135118304)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.459207)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.459207)

	11-372, gnl\|bosTau2\|chr6 (8404059-8404411)
	11-372, gnl\|Hg17\|chr4 (104329136-104328424)
	11-372, gnl\|Mm7\|chr3 (135117980-135118304)