Non-Coding RNA Search

Ss1.1-rpigcf0_007804.5

Sequence:


               
               GTTACTTATAGAGGTTATGGAAAATTTAAGTAGCACTATCAATGAGATGTTATTTTGTCC
TCTAAGAAATACTGCACATTTCATCTATTTTTTTCATCCATTTGGAAGTCATTAATCTTT
TTACTTGTTTGGGAATTGCAGGCGATCTTTATTTCGAAGTTCTAGCATTTTGGATCATAA
TGAAGGAAGTGGTCCTATAGCCTTTGCCCACAAGAGAATGACACCATCTTTCATGCTTAC
CACAGGGAGTCAGACTCAGTGTACCTCCTATTTCATTGAACCTGTACAGTGGATGGAATC
CACTTTGTTGGGAGTGATGGATGGACAGGTGAGAACACATTTTAATTTTATGTTATCTAT
ATTTTGTTTCTTCTTTCATTTTAAACCGTATTTTGCTCCATCTTAACTACTTTTCTTTCT
AAAGATTTTATCTTTCTATTATAGACAAGATTCTATCAAAGCTGAATTAATTAAATAAAA
ACCAGCTGATCTGAAATAGTGAACCACTTTTGGTTGAGTGCTGATGGTCTAAGTGAATTC
GAATTCCTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTACTTATAGAGGTTATGGAAAATTTAAGTAGCACTATCAATGAGATGTTATTTTGTCC
TCTAAGAAATACTGCACATTTCATCTATTTTTTTCATCCATTTGGAAGTCATTAATCTTT
TTACTTGTTTGGGAATTGCAGGCGATCTTTATTTCGAAGTTCTAGCATTTTGGATCATAA
TGAAGGAAGTGGTCCTATAGCCTTTGCCCACAAGAGAATGACACCATCTTTCATGCTTAC
CACAGGGAGTCAGACTCAGTGTACCTCCTATTTCATTGAACCTGTACAGTGGATGGAATC
CACTTTGTTGGGAGTGATGGATGGACAGGTGAGAACACATTTTAATTTTATGTTATCTAT
ATTTTGTTTCTTCTTTCATTTTAAACCGTATTTTGCTCCATCTTAACTACTTTTCTTTCT
AAAGATTTTATCTTTCTATTATAGACAAGATTCTATCAAAGCTGAATTAATTAAATAAAA
ACCAGCTGATCTGAAATAGTGAACCACTTTTGGTTGAGTGCTGATGGTCTAAGTGAATTC
GAATTCCTGCAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61883765|ref|XP_581568.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61883765|ref|XP_581568.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr3 (18988425-18987866)
               

               
               1-540, gnl|Hg17|chr1 (158454079-158454946)
               

               
               1-540, gnl|Mm7|chr1 (170856443-170855202)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr3 (18988425-18987866)
               

               
               1-540, gnl|Hg17|chr1 (158454079-158454946)
               

               
               1-540, gnl|Mm7|chr1 (170856443-170855202)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (1.37762)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.37762)

	1-540, gnl\|bosTau2\|chr3 (18988425-18987866)
	1-540, gnl\|Hg17\|chr1 (158454079-158454946)
	1-540, gnl\|Mm7\|chr1 (170856443-170855202)