Non-Coding RNA Search

Ss1.1-rpigcf0_007878.5

Sequence:


               
               CTGCAGGAATCGAATTGAAAATATATTCTGCCTTATTAATCATCTGGGCTTAGGAGCAGA
GACTGATTTGAGTACCCACAATCTGCACGACTGCACCAAGTGTGTGTAAAATAAATGGTA
TCTCTTCCCCAAGCTTACACTGTTTGGACAGGAGGATTGAGGAGAAATGAGATTTTATTG
TAATGGGAGGTGGTATTATTTCAATGGCACTGTTTCATCACTGTTCCTAAAACCATTTTC
TTCATGATAACCTTTGCTTGTAATAAACCATCAAGTTGTCCTATACCCTTTTTGCCCCAG
GCAGATTCTCACTTCCCTCCTGATCTGTAGGCTGATGGGGCCGAGGTAGCTGCTGGGGAG
AAGGCTCTGGAGCCAGCTGCTTAGGGTGGATTCGAGCTCCACCCCTTGCTAGCTGTGGAA
ACCTGGGTGACTTCCTTGACTTCTCTGAGCCTCAGGTCCCTTAGCTGGAAATGAGATTAA
GAAGAGTACCCACTCCTAGGGAAATCGTGGGGATCAAACAAGTTAGCGCAGTACTTTGAA
AAACGCTTGGCATGTTGTAAGTGCTCAGTAAATATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATCGAATTGAAAATATATTCTGCCTTATTAATCATCTGGGCTTAGGAGCAGA
GACTGATTTGAGTACCCACAATCTGCACGACTGCACCAAGTGTGTGTAAAATAAATGGTA
TCTCTTCCCCAAGCTTACACTGTTTGGACAGGAGGATTGAGGAGAAATGAGATTTTATTG
TAATGGGAGGTGGTATTATTTCAATGGCACTGTTTCATCACTGTTCCTAAAACCATTTTC
TTCATGATAACCTTTGCTTGTAATAAACCATCAAGTTGTCCTATACCCTTTTTGCCCCAG
GCAGATTCTCACTTCCCTCCTGATCTGTAGGCTGATGGGGCCGAGGTAGCTGCTGGGGAG
AAGGCTCTGGAGCCAGCTGCTTAGGGTGGATTCGAGCTCCACCCCTTGCTAGCTGTGGAA
ACCTGGGTGACTTCCTTGACTTCTCTGAGCCTCAGGTCCCTTAGCTGGAAATGAGATTAA
GAAGAGTACCCACTCCTAGGGAAATCGTGGGGATCAAACAAGTTAGCGCAGTACTTTGAA
AAACGCTTGGCATGTTGTAAGTGCTCAGTAAATATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               19-576, gnl|bosTau2|chr4 (61342843-61343381)
               

               
               19-576, gnl|Hg17|chr14 (33246125-33245587)
               

               
               19-576, gnl|Mm7|chr12 (51994580-51994028)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-576, gnl|bosTau2|chr4 (61342843-61343381)
               

               
               19-576, gnl|Hg17|chr14 (33246125-33245587)
               

               
               19-576, gnl|Mm7|chr12 (51994580-51994028)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (1.83683)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.83683)

	19-576, gnl\|bosTau2\|chr4 (61342843-61343381)
	19-576, gnl\|Hg17\|chr14 (33246125-33245587)
	19-576, gnl\|Mm7\|chr12 (51994580-51994028)