Non-Coding RNA Search

Ss1.1-rpigcf0_009214.5

Sequence:


               
               TCCGAATTCCTTCGACAGCAGTGATGATGAATCTGGTTCTGAAGATGATAGCAATAGGTT
CAAAATTAAACCTCAGTTTGAGGGCAGAGCTGGACAGAAGGTTGGTGAATACTGAAAATA
ATGAAACTTGCAACATTGTCCTTATTTTTCGACATAGTCCTTAAATCTAGCTTAATGCTG
ATAGACCTAGACCCATACTCCAGTGTTCCCGGTGTTTTCTTTGAGAGTGAGTCCTCCATG
ATCCTGTGATTGGTTCCTGGGTAGGTGAGGTTGTGCAGACGTTGATATAGTGAACTTTAC
AGCATGAAAGTGTACTTGGAGGATCTTAATGATAAGCAGTTTCTTGGGAATATGGTGATT
AGTTGTCTTTGTGTTTTGTTTATAGCTCATGGATTTGCAGTCCCACTTTGGCACTGATGA
CAGGTTTCGCATGGACTCTCGATTTCTAGAAAGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGAATTCCTTCGACAGCAGTGATGATGAATCTGGTTCTGAAGATGATAGCAATAGGTT
CAAAATTAAACCTCAGTTTGAGGGCAGAGCTGGACAGAAGGTTGGTGAATACTGAAAATA
ATGAAACTTGCAACATTGTCCTTATTTTTCGACATAGTCCTTAAATCTAGCTTAATGCTG
ATAGACCTAGACCCATACTCCAGTGTTCCCGGTGTTTTCTTTGAGAGTGAGTCCTCCATG
ATCCTGTGATTGGTTCCTGGGTAGGTGAGGTTGTGCAGACGTTGATATAGTGAACTTTAC
AGCATGAAAGTGTACTTGGAGGATCTTAATGATAAGCAGTTTCTTGGGAATATGGTGATT
AGTTGTCTTTGTGTTTTGTTTATAGCTCATGGATTTGCAGTCCCACTTTGGCACTGATGA
CAGGTTTCGCATGGACTCTCGATTTCTAGAAAGTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-456, gnl|bosTau2|chr8 (46671356-46671802)
               

               
               10-456, gnl|Hg17|chr9 (92152483-92152028)
               

               
               10-456, gnl|Mm7|chr13 (49148634-49149326)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-456, gnl|bosTau2|chr8 (46671356-46671802)
               

               
               10-456, gnl|Hg17|chr9 (92152483-92152028)
               

               
               10-456, gnl|Mm7|chr13 (49148634-49149326)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	10-456, gnl\|bosTau2\|chr8 (46671356-46671802)
	10-456, gnl\|Hg17\|chr9 (92152483-92152028)
	10-456, gnl\|Mm7\|chr13 (49148634-49149326)