Non-Coding RNA Search

Ss1.1-rpigcf0_010185.5

Sequence:


               
               TGAGTGGAAAACTATTCCCCAAATAAAACAAAAGACTGAAATTTATTTTCCCACTTGGTT
CATTTTTTCCATTCATCAACAAAAAAAAATTTTTTTCCTTTTTACGGCCACACCTATGGC
ATTACGGAAGTTCCCAGCCAGGGGTGGAATCAAAGGTGCAGCTGCAGCCAACAGCACAGC
CACAACAACGCCAGATCCGAGCCACATCCGTGACGGCTTGCAGCAATGCTGGATCCTTAA
CCCACCGACTGGAGGCCAGGGATCGAACCCACATCATCATGGTTCAACCTGCTAAGCCAC
AACCAGAAACTCCGCATCGACAAAATTTAAGTAAAAGAAACCATGGACAAGGACAGACTC
ACAGTTCTTTCTTCCTCTGAGCCATTCTACAACACAGAAACCTTTTCCCTACTACCAATT
CTAAGAGCACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTGGAAAACTATTCCCCAAATAAAACAAAAGACTGAAATTTATTTTCCCACTTGGTT
CATTTTTTCCATTCATCAACAAAAAAAAATTTTTTTCCTTTTTACGGCCACACCTATGGC
ATTACGGAAGTTCCCAGCCAGGGGTGGAATCAAAGGTGCAGCTGCAGCCAACAGCACAGC
CACAACAACGCCAGATCCGAGCCACATCCGTGACGGCTTGCAGCAATGCTGGATCCTTAA
CCCACCGACTGGAGGCCAGGGATCGAACCCACATCATCATGGTTCAACCTGCTAAGCCAC
AACCAGAAACTCCGCATCGACAAAATTTAAGTAAAAGAAACCATGGACAAGGACAGACTC
ACAGTTCTTTCTTCCTCTGAGCCATTCTACAACACAGAAACCTTTTCCCTACTACCAATT
CTAAGAGCACAG

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               316-432, gnl|bosTau2|chr14 (13948233-13948117)
               

               
               316-432, gnl|canFam2|chr13 (7031281-7031399)
               

               
               316-432, gnl|echTel1|scaffold_318908 (31345-31458)
               

               
               316-432, gnl|hg17|chr8 (103479125-103479248)
               

               
               316-432, gnl|panTro1|chr7 (105850686-105850809)
               

               
               316-432, gnl|rheMac2|chr8 (104898430-104898557)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               316-432, gnl|bosTau2|chr14 (13948233-13948117)
               

               
               316-432, gnl|canFam2|chr13 (7031281-7031399)
               

               
               316-432, gnl|echTel1|scaffold_318908 (31345-31458)
               

               
               316-432, gnl|hg17|chr8 (103479125-103479248)
               

               
               316-432, gnl|panTro1|chr7 (105850686-105850809)
               

               
               316-432, gnl|rheMac2|chr8 (104898430-104898557)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	316-432, gnl\|bosTau2\|chr14 (13948233-13948117)
	316-432, gnl\|canFam2\|chr13 (7031281-7031399)
	316-432, gnl\|echTel1\|scaffold_318908 (31345-31458)
	316-432, gnl\|hg17\|chr8 (103479125-103479248)
	316-432, gnl\|panTro1\|chr7 (105850686-105850809)
	316-432, gnl\|rheMac2\|chr8 (104898430-104898557)