Non-Coding RNA Search

Ss1.1-rpigcf0_010488.5

Sequence:


               
               CCCCCGGGCTGCAGGAATCGAATTCGTGCTGTAATTTGAGGTAGGTATTTCCTAATCTCC
ATTTTATGGGTGATATTGAGCCTTAGGGTAAAAAACCATAAAATCAGTCCATGGTCATAC
AACTACAGTGTGGCAGAGGCAAGATTTCCACCTAAATTTGTCTGACTTTAAAACCCATGT
TTTAACCATTTTGTTACAGTGTCTCTTTTTCAAGGAGATTGTCAGTGAATGTAAATGAAT
TACATTTTAAGAATTAATTTCTCTTACAGATGGAGCAGCCATGCGGGCTGGAGTACAGAC
AGGTGATCGAATCATCAAGGTAAAGAGACTCTTCAGGAATTTTTGGTAGAATTAAAAAAC
AGCATATATTAGACATATTTTGACTTTTTCACTTGTGTTTTTATTAAAAGTAGCACATTA
TATATGATGGATTTATTGACTATAAAAACTTTTATTTCATTTATTTTATTTATTTATTTA
TTTGTCTTTTTAGGGTCCCCCTGCAACATATGGAGGACCCGCAGGCTAGGGGTCCAATTG
GAGCTGTAGCTGCTGACCTGTGGCTGTGGTACAGGCCAGCAGCTGTAGCTCTGATTTGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCCGGGCTGCAGGAATCGAATTCGTGCTGTAATTTGAGGTAGGTATTTCCTAATCTCC
ATTTTATGGGTGATATTGAGCCTTAGGGTAAAAAACCATAAAATCAGTCCATGGTCATAC
AACTACAGTGTGGCAGAGGCAAGATTTCCACCTAAATTTGTCTGACTTTAAAACCCATGT
TTTAACCATTTTGTTACAGTGTCTCTTTTTCAAGGAGATTGTCAGTGAATGTAAATGAAT
TACATTTTAAGAATTAATTTCTCTTACAGATGGAGCAGCCATGCGGGCTGGAGTACAGAC
AGGTGATCGAATCATCAAGGTAAAGAGACTCTTCAGGAATTTTTGGTAGAATTAAAAAAC
AGCATATATTAGACATATTTTGACTTTTTCACTTGTGTTTTTATTAAAAGTAGCACATTA
TATATGATGGATTTATTGACTATAAAAACTTTTATTTCATTTATTTTATTTATTTATTTA
TTTGTCTTTTTAGGGTCCCCCTGCAACATATGGAGGACCCGCAGGCTAGGGGTCCAATTG
GAGCTGTAGCTGCTGACCTGTGGCTGTGGTACAGGCCAGCAGCTGTAGCTCTGATTTGAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               44-477, gnl|bosTau2|chr15 (14562483-14562041)
               

               
               44-477, gnl|Hg17|chr11 (119797220-119797933)
               

               
               44-477, gnl|Mm7|chr9 (42960813-42960414)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-477, gnl|bosTau2|chr15 (14562483-14562041)
               

               
               44-477, gnl|Hg17|chr11 (119797220-119797933)
               

               
               44-477, gnl|Mm7|chr9 (42960813-42960414)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (0.612276)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.612276)

	44-477, gnl\|bosTau2\|chr15 (14562483-14562041)
	44-477, gnl\|Hg17\|chr11 (119797220-119797933)
	44-477, gnl\|Mm7\|chr9 (42960813-42960414)