Non-Coding RNA Search

Ss1.1-rpigcf0_010916.5

Sequence:


               
               ACGCCGGATCCCCAACCCACTGAGTAAGGCCAAGGATTGAACCCGCAACCTCATGGTTCC
TAGTCGGATTCGTTTCCACTGCGCCATGACGGCAACTCCTGTTCCTAAATTCTTACTTGC
TGTATTATTATACTAGGTCAAAAGCTTGACTAGGAAACACCTTTAATACACTTTAAAGGA
ATTCTTATTTCATAAACAGTAAAACAACTGGCAAAAAGGAAAAGATGGCGCATGATACAT
TAAGAAGGTGCTGTGTTCAGACAGCACACTGACGACACCGTGCAAACTATAGCATTTACA
TACTTTAAACTTCTATAAGATACAGACCCTCTCAGGTTTCCAGTATTTAAGTGATTTTGG
TGTTCCCCCGACCCAAGGACATGTTCACTTGTTAATGTTTTTTCCAAGGGCTTATATGGA
GCTGTATTATTTTGCTGAATTTCCCTTAGAGATAGGTAGGTACCAACTACAAAGAAACCT
GTTTCTCATAAAGGTGAAACTGGGATCATGGGAGAACCAAGAGTAATACCCAACTCTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGCCGGATCCCCAACCCACTGAGTAAGGCCAAGGATTGAACCCGCAACCTCATGGTTCC
TAGTCGGATTCGTTTCCACTGCGCCATGACGGCAACTCCTGTTCCTAAATTCTTACTTGC
TGTATTATTATACTAGGTCAAAAGCTTGACTAGGAAACACCTTTAATACACTTTAAAGGA
ATTCTTATTTCATAAACAGTAAAACAACTGGCAAAAAGGAAAAGATGGCGCATGATACAT
TAAGAAGGTGCTGTGTTCAGACAGCACACTGACGACACCGTGCAAACTATAGCATTTACA
TACTTTAAACTTCTATAAGATACAGACCCTCTCAGGTTTCCAGTATTTAAGTGATTTTGG
TGTTCCCCCGACCCAAGGACATGTTCACTTGTTAATGTTTTTTCCAAGGGCTTATATGGA
GCTGTATTATTTTGCTGAATTTCCCTTAGAGATAGGTAGGTACCAACTACAAAGAAACCT
GTTTCTCATAAAGGTGAAACTGGGATCATGGGAGAACCAAGAGTAATACCCAACTCTCCT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               100-297, gnl|bosTau2|chr10 (17355241-17355046)
               

               
               100-297, gnl|Hg17|chr15 (32317161-32317349)
               


               
               322-534, gnl|bosTau2|chr10 (17354897-17354688)
               

               
               322-534, gnl|Hg17|chr15 (32317425-32317612)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-297, gnl|bosTau2|chr10 (17355241-17355046)
               

               
               100-297, gnl|Hg17|chr15 (32317161-32317349)
               


               
               322-534, gnl|bosTau2|chr10 (17354897-17354688)
               

               
               322-534, gnl|Hg17|chr15 (32317425-32317612)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.612276)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.612276)

	100-297, gnl\|bosTau2\|chr10 (17355241-17355046)
	100-297, gnl\|Hg17\|chr15 (32317161-32317349)

	322-534, gnl\|bosTau2\|chr10 (17354897-17354688)
	322-534, gnl\|Hg17\|chr15 (32317425-32317612)